Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN4BQ8IWT1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN4BQ8IWT1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 AC020907.5-201ENST00000624372 1936 ntBASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.97■□□□□ 0.95
SCN4BQ8IWT1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 AC073314.1-201ENST00000568729 2216 ntBASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCN4BQ8IWT1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCN4BQ8IWT1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCN4BQ8IWT1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms