Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SCXQ7RTU7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC13.1□□□□□ -0.31
SCXQ7RTU7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 RPS2P52-201ENST00000469610 820 ntBASIC13.09□□□□□ -0.31
SCXQ7RTU7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 AP003097.1-201ENST00000530657 1135 ntBASIC13.09□□□□□ -0.31
SCXQ7RTU7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SCXQ7RTU7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SCXQ7RTU7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SCXQ7RTU7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SCXQ7RTU7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SCXQ7RTU7 AL020996.1-203ENST00000536896 2307 ntBASIC13.08□□□□□ -0.31
SCXQ7RTU7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SCXQ7RTU7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SCXQ7RTU7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SCXQ7RTU7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SCXQ7RTU7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 AC128676.1-201ENST00000454392 318 ntBASIC13.08□□□□□ -0.32
SCXQ7RTU7 AC026366.1-201ENST00000488803 879 ntBASIC13.08□□□□□ -0.32
SCXQ7RTU7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SCXQ7RTU7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SCXQ7RTU7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCXQ7RTU7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SCXQ7RTU7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.07□□□□□ -0.32
SCXQ7RTU7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms