Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
VPS13CQ709C8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.68■□□□□ 0.26
VPS13CQ709C8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13CQ709C8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.68■□□□□ 0.26
VPS13CQ709C8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.68■□□□□ 0.26
VPS13CQ709C8 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.68■□□□□ 0.26
VPS13CQ709C8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VPS13CQ709C8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS13CQ709C8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS13CQ709C8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS13CQ709C8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS13CQ709C8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS13CQ709C8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS13CQ709C8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
VPS13CQ709C8 AC063952.2-201ENST00000498792 1227 ntBASIC16.67■□□□□ 0.26
VPS13CQ709C8 AP000550.4-202ENST00000639755 178 ntBASIC16.67■□□□□ 0.26
VPS13CQ709C8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VPS13CQ709C8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS13CQ709C8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VPS13CQ709C8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 AC091076.1-201ENST00000610741 619 ntBASIC16.66■□□□□ 0.26
VPS13CQ709C8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
VPS13CQ709C8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
VPS13CQ709C8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 AL450487.1-201ENST00000426799 995 ntBASIC16.65■□□□□ 0.26
VPS13CQ709C8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 AP005242.2-201ENST00000580065 1175 ntBASIC16.65■□□□□ 0.26
VPS13CQ709C8 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 AC093458.2-201ENST00000623150 629 ntBASIC16.65■□□□□ 0.26
VPS13CQ709C8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 AC005332.1-201ENST00000577698 1310 ntBASIC16.65■□□□□ 0.26
VPS13CQ709C8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 AL359075.1-203ENST00000462729 1002 ntBASIC16.65■□□□□ 0.26
VPS13CQ709C8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
VPS13CQ709C8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.65■□□□□ 0.26
VPS13CQ709C8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.64■□□□□ 0.26
VPS13CQ709C8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.64■□□□□ 0.26
VPS13CQ709C8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.64■□□□□ 0.26
VPS13CQ709C8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.64■□□□□ 0.26
VPS13CQ709C8 AL121906.2-201ENST00000621597 723 ntBASIC16.64■□□□□ 0.26
VPS13CQ709C8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.64■□□□□ 0.26
VPS13CQ709C8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS13CQ709C8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS13CQ709C8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS13CQ709C8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
VPS13CQ709C8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.64■□□□□ 0.25
VPS13CQ709C8 FSCN1P1-201ENST00000568912 1481 ntBASIC16.64■□□□□ 0.25
VPS13CQ709C8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VPS13CQ709C8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VPS13CQ709C8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms