Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PACS1Q6VY07 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.08■□□□□ 0.81
PACS1Q6VY07 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PACS1Q6VY07 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PACS1Q6VY07 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.08■□□□□ 0.81
PACS1Q6VY07 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PACS1Q6VY07 AL589743.5-201ENST00000616611 1050 ntBASIC20.08■□□□□ 0.81
PACS1Q6VY07 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PACS1Q6VY07 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PACS1Q6VY07 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.08■□□□□ 0.8
PACS1Q6VY07 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.8
PACS1Q6VY07 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PACS1Q6VY07 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PACS1Q6VY07 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PACS1Q6VY07 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.08■□□□□ 0.8
PACS1Q6VY07 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PACS1Q6VY07 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
PACS1Q6VY07 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PACS1Q6VY07 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PACS1Q6VY07 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.08■□□□□ 0.8
PACS1Q6VY07 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PACS1Q6VY07 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PACS1Q6VY07 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PACS1Q6VY07 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PACS1Q6VY07 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PACS1Q6VY07 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 AL355472.2-201ENST00000422958 438 ntBASIC20.07■□□□□ 0.8
PACS1Q6VY07 AC083906.2-201ENST00000511578 360 ntBASIC20.07■□□□□ 0.8
PACS1Q6VY07 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 AC090192.1-201ENST00000517740 490 ntBASIC20.07■□□□□ 0.8
PACS1Q6VY07 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PACS1Q6VY07 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PACS1Q6VY07 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.07■□□□□ 0.8
PACS1Q6VY07 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PACS1Q6VY07 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PACS1Q6VY07 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.06■□□□□ 0.8
PACS1Q6VY07 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PACS1Q6VY07 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PACS1Q6VY07 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PACS1Q6VY07 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PACS1Q6VY07 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PACS1Q6VY07 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PACS1Q6VY07 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PACS1Q6VY07 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PACS1Q6VY07 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.06■□□□□ 0.8
PACS1Q6VY07 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PACS1Q6VY07 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.06■□□□□ 0.8
PACS1Q6VY07 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
PACS1Q6VY07 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.06■□□□□ 0.8
PACS1Q6VY07 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PACS1Q6VY07 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
PACS1Q6VY07 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PACS1Q6VY07 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.05■□□□□ 0.8
PACS1Q6VY07 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.05■□□□□ 0.8
PACS1Q6VY07 GUSBP6-202ENST00000438529 1198 ntBASIC20.05■□□□□ 0.8
PACS1Q6VY07 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.05■□□□□ 0.8
PACS1Q6VY07 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.05■□□□□ 0.8
PACS1Q6VY07 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.05■□□□□ 0.8
PACS1Q6VY07 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.05■□□□□ 0.8
PACS1Q6VY07 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS1Q6VY07 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS1Q6VY07 KRT17P1-201ENST00000399211 1546 ntBASIC20.05■□□□□ 0.8
PACS1Q6VY07 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS1Q6VY07 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.05■□□□□ 0.8
PACS1Q6VY07 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PACS1Q6VY07 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PACS1Q6VY07 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.04■□□□□ 0.8
PACS1Q6VY07 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
PACS1Q6VY07 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PACS1Q6VY07 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.04■□□□□ 0.8
PACS1Q6VY07 GPX1P1-201ENST00000388829 606 ntBASIC20.04■□□□□ 0.8
PACS1Q6VY07 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.04■□□□□ 0.8
PACS1Q6VY07 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.04■□□□□ 0.8
PACS1Q6VY07 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PACS1Q6VY07 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PACS1Q6VY07 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACS1Q6VY07 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms