Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 FP700111.2-201ENST00000619190 1892 ntBASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 AC079089.2-201ENST00000531211 1277 ntBASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 AL050303.2-201ENST00000619798 666 ntBASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 AC231657.2-201ENST00000624556 255 ntBASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXR1Q6PIV2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXR1Q6PIV2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXR1Q6PIV2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
FOXR1Q6PIV2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXR1Q6PIV2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 AC009237.3-201ENST00000393279 1427 ntBASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 AC018470.1-201ENST00000624790 3129 ntBASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 SLC29A4P1-201ENST00000398760 971 ntBASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 AP004607.7-201ENST00000527152 1677 ntBASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXR1Q6PIV2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 PCDHB18P-201ENST00000524813 2368 ntBASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 AC093484.2-201ENST00000580996 2166 ntBASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXR1Q6PIV2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 TSPY6P-201ENST00000448518 926 ntBASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXR1Q6PIV2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 AL133373.2-201ENST00000623187 2828 ntBASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 DUX4L16-201ENST00000555130 1264 ntBASIC20.61■□□□□ 0.89
FOXR1Q6PIV2 AL138781.1-201ENST00000566567 1274 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms