Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 RARRES2P11-201ENST00000635158 484 ntBASIC17.27■□□□□ 0.36
C11orf88Q6PI97 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
C11orf88Q6PI97 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.27■□□□□ 0.35
C11orf88Q6PI97 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.27■□□□□ 0.35
C11orf88Q6PI97 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
C11orf88Q6PI97 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
C11orf88Q6PI97 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.27■□□□□ 0.35
C11orf88Q6PI97 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
C11orf88Q6PI97 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
C11orf88Q6PI97 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C11orf88Q6PI97 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C11orf88Q6PI97 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C11orf88Q6PI97 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms