Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 AL121912.1-201ENST00000603683 238 ntBASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 AL023803.3-201ENST00000615559 522 ntBASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF38BQ5VTL8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 AP000523.1-201ENST00000398242 1049 ntBASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 AL390719.2-201ENST00000606993 987 ntBASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 AL121672.3-201ENST00000608644 468 ntBASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRPF38BQ5VTL8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 IL9RP2-201ENST00000423948 1312 ntBASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 AL645929.1-201ENST00000420084 975 ntBASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 AL353719.1-201ENST00000566847 864 ntBASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRPF38BQ5VTL8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 PMS2P7-201ENST00000506558 1336 ntBASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 TSPY12P-201ENST00000421279 868 ntBASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 SPDYE13P-201ENST00000445314 798 ntBASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 BX276092.5-203ENST00000456199 560 ntBASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 HLA-J-203ENST00000494367 1087 ntBASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 AC239800.4-201ENST00000603712 296 ntBASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRPF38BQ5VTL8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.65■■□□□ 1.06
PRPF38BQ5VTL8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF38BQ5VTL8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF38BQ5VTL8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PRPF38BQ5VTL8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF38BQ5VTL8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
PRPF38BQ5VTL8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRPF38BQ5VTL8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
PRPF38BQ5VTL8 AC138932.3-201ENST00000567634 1902 ntBASIC21.65■■□□□ 1.06
PRPF38BQ5VTL8 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRPF38BQ5VTL8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRPF38BQ5VTL8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 AP002383.4-201ENST00000442518 975 ntBASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 AC011298.2-201ENST00000617989 482 ntBASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PRPF38BQ5VTL8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms