Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 AC092364.2-202ENST00000597012 1073 ntBASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL13A1Q5TAT6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 SPDYE15P-201ENST00000424157 909 ntBASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 AC023632.3-201ENST00000521633 145 ntBASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL13A1Q5TAT6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 RASA4DP-201ENST00000460726 1199 ntBASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 AC011298.2-201ENST00000617989 482 ntBASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
COL13A1Q5TAT6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL13A1Q5TAT6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.58■■□□□ 1.21
COL13A1Q5TAT6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL13A1Q5TAT6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL13A1Q5TAT6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
COL13A1Q5TAT6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC22.58■■□□□ 1.21
COL13A1Q5TAT6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
COL13A1Q5TAT6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.2
COL13A1Q5TAT6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 FAM8A3P-201ENST00000427218 844 ntBASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.57■■□□□ 1.2
COL13A1Q5TAT6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 GCSHP2-201ENST00000560971 527 ntBASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.56■■□□□ 1.2
COL13A1Q5TAT6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL13A1Q5TAT6 RCC2P6-201ENST00000526625 1557 ntBASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms