Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CERKLQ49MI3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CERKLQ49MI3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.35■■□□□ 1.33
CERKLQ49MI3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 AP006587.1-201ENST00000534129 1502 ntBASIC23.34■■□□□ 1.33
CERKLQ49MI3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CERKLQ49MI3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CERKLQ49MI3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
CERKLQ49MI3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.34■■□□□ 1.33
CERKLQ49MI3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CERKLQ49MI3 AC087499.1-201ENST00000418141 1075 ntBASIC23.34■■□□□ 1.33
CERKLQ49MI3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.34■■□□□ 1.33
CERKLQ49MI3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.34■■□□□ 1.33
CERKLQ49MI3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CERKLQ49MI3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 AC116351.2-201ENST00000606540 1585 ntBASIC23.34■■□□□ 1.33
CERKLQ49MI3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CERKLQ49MI3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.34■■□□□ 1.33
CERKLQ49MI3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CERKLQ49MI3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CERKLQ49MI3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CERKLQ49MI3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.33■■□□□ 1.33
CERKLQ49MI3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CERKLQ49MI3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CERKLQ49MI3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.33■■□□□ 1.33
CERKLQ49MI3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.33■■□□□ 1.33
CERKLQ49MI3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
CERKLQ49MI3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CERKLQ49MI3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
CERKLQ49MI3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CERKLQ49MI3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
CERKLQ49MI3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CERKLQ49MI3 SMG8-203ENST00000578922 2178 ntBASIC23.33■■□□□ 1.32
CERKLQ49MI3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.32■■□□□ 1.32
CERKLQ49MI3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CERKLQ49MI3 TFP1-202ENST00000475455 1573 ntBASIC23.32■■□□□ 1.32
CERKLQ49MI3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.32■■□□□ 1.32
CERKLQ49MI3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CERKLQ49MI3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CERKLQ49MI3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CERKLQ49MI3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.32■■□□□ 1.32
CERKLQ49MI3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.32■■□□□ 1.32
CERKLQ49MI3 AC133561.5-201ENST00000635547 218 ntBASIC23.32■■□□□ 1.32
CERKLQ49MI3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CERKLQ49MI3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.32■■□□□ 1.32
CERKLQ49MI3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CERKLQ49MI3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CERKLQ49MI3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CERKLQ49MI3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.31■■□□□ 1.32
CERKLQ49MI3 AC018553.1-201ENST00000616682 1458 ntBASIC23.31■■□□□ 1.32
CERKLQ49MI3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.31■■□□□ 1.32
CERKLQ49MI3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 NUDT16P1-203ENST00000513809 620 ntBASIC23.31■■□□□ 1.32
CERKLQ49MI3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.31■■□□□ 1.32
CERKLQ49MI3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.31■■□□□ 1.32
CERKLQ49MI3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CERKLQ49MI3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CERKLQ49MI3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.31■■□□□ 1.32
CERKLQ49MI3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CERKLQ49MI3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CERKLQ49MI3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 NIFKP9-201ENST00000419265 221 ntBASIC23.3■■□□□ 1.32
CERKLQ49MI3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CERKLQ49MI3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 CR392000.1-201ENST00000624770 1228 ntBASIC23.3■■□□□ 1.32
CERKLQ49MI3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
CERKLQ49MI3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CERKLQ49MI3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CERKLQ49MI3 AC007375.3-201ENST00000600936 2314 ntBASIC23.3■■□□□ 1.32
CERKLQ49MI3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.29■■□□□ 1.32
CERKLQ49MI3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CERKLQ49MI3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CERKLQ49MI3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.29■■□□□ 1.32
CERKLQ49MI3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms