Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.39■□□□□ 0.37
HIST1H3AP68431 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H3AP68431 AP001271.2-201ENST00000624018 1556 ntBASIC17.39■□□□□ 0.37
HIST1H3AP68431 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H3AP68431 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H3AP68431 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HIST1H3AP68431 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HIST1H3AP68431 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 AC073210.2-201ENST00000430369 194 ntBASIC17.38■□□□□ 0.37
HIST1H3AP68431 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 AC091874.3-201ENST00000512672 1195 ntBASIC17.38■□□□□ 0.37
HIST1H3AP68431 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.38■□□□□ 0.37
HIST1H3AP68431 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIST1H3AP68431 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H3AP68431 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H3AP68431 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H3AP68431 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H3AP68431 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H3AP68431 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H3AP68431 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 MIR4758-201ENST00000577688 71 ntBASIC17.37■□□□□ 0.37
HIST1H3AP68431 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H3AP68431 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIST1H3AP68431 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.37■□□□□ 0.37
HIST1H3AP68431 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 PHGDH-210ENST00000641115 1638 ntBASIC17.36■□□□□ 0.37
HIST1H3AP68431 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.36■□□□□ 0.37
HIST1H3AP68431 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 MYC-209ENST00000641252 345 ntBASIC17.36■□□□□ 0.37
HIST1H3AP68431 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HIST1H3AP68431 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIST1H3AP68431 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIST1H3AP68431 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HIST1H3AP68431 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms