Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.88■□□□□ 0.61
SKP1P63208 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SKP1P63208 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.88■□□□□ 0.61
SKP1P63208 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.88■□□□□ 0.61
SKP1P63208 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SKP1P63208 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SKP1P63208 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SKP1P63208 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.88■□□□□ 0.61
SKP1P63208 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.88■□□□□ 0.61
SKP1P63208 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SKP1P63208 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.88■□□□□ 0.61
SKP1P63208 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SKP1P63208 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
SKP1P63208 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SKP1P63208 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SKP1P63208 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SKP1P63208 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
SKP1P63208 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SKP1P63208 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.87■□□□□ 0.61
SKP1P63208 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SKP1P63208 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SKP1P63208 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
SKP1P63208 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SKP1P63208 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
SKP1P63208 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.87■□□□□ 0.61
SKP1P63208 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.87■□□□□ 0.61
SKP1P63208 PRKY-204ENST00000533551 1019 ntBASIC18.87■□□□□ 0.61
SKP1P63208 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SKP1P63208 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SKP1P63208 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SKP1P63208 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SKP1P63208 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SKP1P63208 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SKP1P63208 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SKP1P63208 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SKP1P63208 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SKP1P63208 LINC01521-201ENST00000504184 1943 ntBASIC18.86■□□□□ 0.61
SKP1P63208 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.86■□□□□ 0.61
SKP1P63208 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SKP1P63208 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.86■□□□□ 0.61
SKP1P63208 BX119927.1-201ENST00000636596 1552 ntBASIC18.86■□□□□ 0.61
SKP1P63208 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.86■□□□□ 0.61
SKP1P63208 RPS2P52-201ENST00000469610 820 ntBASIC18.86■□□□□ 0.61
SKP1P63208 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.86■□□□□ 0.61
SKP1P63208 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.86■□□□□ 0.61
SKP1P63208 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.86■□□□□ 0.61
SKP1P63208 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SKP1P63208 AC006058.3-201ENST00000606217 1069 ntBASIC18.86■□□□□ 0.61
SKP1P63208 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.86■□□□□ 0.61
SKP1P63208 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SKP1P63208 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SKP1P63208 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SKP1P63208 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.85■□□□□ 0.61
SKP1P63208 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SKP1P63208 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.85■□□□□ 0.61
SKP1P63208 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 KRT18P29-201ENST00000397031 1267 ntBASIC18.85■□□□□ 0.61
SKP1P63208 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.85■□□□□ 0.61
SKP1P63208 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SKP1P63208 TSPY20P-201ENST00000450910 630 ntBASIC18.85■□□□□ 0.61
SKP1P63208 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SKP1P63208 MIR4651-201ENST00000582622 73 ntBASIC18.85■□□□□ 0.61
SKP1P63208 AC008403.3-201ENST00000598924 454 ntBASIC18.85■□□□□ 0.61
SKP1P63208 AL121829.2-201ENST00000620908 328 ntBASIC18.85■□□□□ 0.61
SKP1P63208 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.85■□□□□ 0.61
SKP1P63208 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
SKP1P63208 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SKP1P63208 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.84■□□□□ 0.61
SKP1P63208 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SKP1P63208 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SKP1P63208 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 ITM2C-210ENST00000620962 501 ntBASIC18.84■□□□□ 0.61
SKP1P63208 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.84■□□□□ 0.61
SKP1P63208 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.84■□□□□ 0.61
SKP1P63208 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SKP1P63208 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms