Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
USP46P62068 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.93■□□□□ 0.94
USP46P62068 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
USP46P62068 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.93■□□□□ 0.94
USP46P62068 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
USP46P62068 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
USP46P62068 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.93■□□□□ 0.94
USP46P62068 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.93■□□□□ 0.94
USP46P62068 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.93■□□□□ 0.94
USP46P62068 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
USP46P62068 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
USP46P62068 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
USP46P62068 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.93■□□□□ 0.94
USP46P62068 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP46P62068 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.92■□□□□ 0.94
USP46P62068 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.92■□□□□ 0.94
USP46P62068 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
USP46P62068 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP46P62068 PRKY-204ENST00000533551 1019 ntBASIC20.92■□□□□ 0.94
USP46P62068 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.92■□□□□ 0.94
USP46P62068 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
USP46P62068 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP46P62068 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.92■□□□□ 0.94
USP46P62068 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.92■□□□□ 0.94
USP46P62068 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.92■□□□□ 0.94
USP46P62068 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
USP46P62068 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
USP46P62068 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.91■□□□□ 0.94
USP46P62068 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
USP46P62068 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.91■□□□□ 0.94
USP46P62068 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.91■□□□□ 0.94
USP46P62068 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.91■□□□□ 0.94
USP46P62068 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
USP46P62068 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP46P62068 AC073314.1-201ENST00000568729 2216 ntBASIC20.9■□□□□ 0.94
USP46P62068 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.9■□□□□ 0.94
USP46P62068 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.9■□□□□ 0.94
USP46P62068 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.9■□□□□ 0.94
USP46P62068 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.9■□□□□ 0.94
USP46P62068 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
USP46P62068 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.9■□□□□ 0.94
USP46P62068 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 AL121906.2-201ENST00000621597 723 ntBASIC20.9■□□□□ 0.94
USP46P62068 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP46P62068 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
USP46P62068 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP46P62068 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
USP46P62068 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
USP46P62068 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
USP46P62068 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
USP46P62068 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.94
USP46P62068 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
USP46P62068 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
USP46P62068 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
USP46P62068 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP46P62068 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP46P62068 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
USP46P62068 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.89■□□□□ 0.93
USP46P62068 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
USP46P62068 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.89■□□□□ 0.93
USP46P62068 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.89■□□□□ 0.93
USP46P62068 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.89■□□□□ 0.93
USP46P62068 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP46P62068 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.89■□□□□ 0.93
USP46P62068 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP46P62068 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP46P62068 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP46P62068 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
USP46P62068 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
USP46P62068 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.88■□□□□ 0.93
USP46P62068 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms