Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.35■□□□□ 0.37
SEC61A1P61619 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SEC61A1P61619 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.35■□□□□ 0.37
SEC61A1P61619 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
SEC61A1P61619 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
SEC61A1P61619 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEC61A1P61619 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.35■□□□□ 0.37
SEC61A1P61619 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SEC61A1P61619 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.34■□□□□ 0.37
SEC61A1P61619 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.34■□□□□ 0.37
SEC61A1P61619 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.34■□□□□ 0.37
SEC61A1P61619 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.34■□□□□ 0.37
SEC61A1P61619 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 AF201337.1-201ENST00000520239 748 ntBASIC17.34■□□□□ 0.37
SEC61A1P61619 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.34■□□□□ 0.37
SEC61A1P61619 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 AL162377.1-201ENST00000618844 1793 ntBASIC17.34■□□□□ 0.37
SEC61A1P61619 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.34■□□□□ 0.37
SEC61A1P61619 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.34■□□□□ 0.37
SEC61A1P61619 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SEC61A1P61619 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEC61A1P61619 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.33■□□□□ 0.37
SEC61A1P61619 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.33■□□□□ 0.37
SEC61A1P61619 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SEC61A1P61619 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
SEC61A1P61619 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEC61A1P61619 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.33■□□□□ 0.36
SEC61A1P61619 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SEC61A1P61619 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEC61A1P61619 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.33■□□□□ 0.36
SEC61A1P61619 AC093787.1-201ENST00000450396 207 ntBASIC17.33■□□□□ 0.36
SEC61A1P61619 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.33■□□□□ 0.36
SEC61A1P61619 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.33■□□□□ 0.36
SEC61A1P61619 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.33■□□□□ 0.36
SEC61A1P61619 AL138781.1-201ENST00000566567 1274 ntBASIC17.33■□□□□ 0.36
SEC61A1P61619 AC016405.3-201ENST00000607710 860 ntBASIC17.33■□□□□ 0.36
SEC61A1P61619 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEC61A1P61619 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEC61A1P61619 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEC61A1P61619 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SEC61A1P61619 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEC61A1P61619 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SEC61A1P61619 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEC61A1P61619 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SEC61A1P61619 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SEC61A1P61619 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.32■□□□□ 0.36
SEC61A1P61619 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.32■□□□□ 0.36
SEC61A1P61619 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SEC61A1P61619 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.32■□□□□ 0.36
SEC61A1P61619 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.32■□□□□ 0.36
SEC61A1P61619 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SEC61A1P61619 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SEC61A1P61619 SLC29A4P1-201ENST00000398760 971 ntBASIC17.32■□□□□ 0.36
SEC61A1P61619 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SEC61A1P61619 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.32■□□□□ 0.36
SEC61A1P61619 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.32■□□□□ 0.36
SEC61A1P61619 AC133552.2-202ENST00000575694 574 ntBASIC17.32■□□□□ 0.36
SEC61A1P61619 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.32■□□□□ 0.36
SEC61A1P61619 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.32■□□□□ 0.36
SEC61A1P61619 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.32■□□□□ 0.36
SEC61A1P61619 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SEC61A1P61619 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SEC61A1P61619 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SEC61A1P61619 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.32■□□□□ 0.36
SEC61A1P61619 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
SEC61A1P61619 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SEC61A1P61619 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms