Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC10.7□□□□□ -0.7
SEC61BP60468 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
SEC61BP60468 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC10.7□□□□□ -0.7
SEC61BP60468 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
SEC61BP60468 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 SRI-203ENST00000419179 1307 ntTSL 2 BASIC10.7□□□□□ -0.7
SEC61BP60468 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 UNC93B2-201ENST00000285383 730 ntBASIC10.7□□□□□ -0.7
SEC61BP60468 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC10.7□□□□□ -0.7
SEC61BP60468 FAM197Y1-201ENST00000421178 764 ntBASIC10.7□□□□□ -0.7
SEC61BP60468 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC10.7□□□□□ -0.7
SEC61BP60468 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC10.7□□□□□ -0.7
SEC61BP60468 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SEC61BP60468 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
SEC61BP60468 AL353708.3-201ENST00000610272 989 ntBASIC10.7□□□□□ -0.7
SEC61BP60468 Six3os1_6.1-201ENST00000620790 196 ntBASIC10.7□□□□□ -0.7
SEC61BP60468 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC10.7□□□□□ -0.7
SEC61BP60468 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 BID-212ENST00000614949 1988 ntTSL 5 BASIC10.7□□□□□ -0.7
SEC61BP60468 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC10.7□□□□□ -0.7
SEC61BP60468 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 Z98882.1-201ENST00000622160 2253 ntBASIC10.69□□□□□ -0.7
SEC61BP60468 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC10.69□□□□□ -0.7
SEC61BP60468 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC10.69□□□□□ -0.7
SEC61BP60468 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SEC61BP60468 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC10.69□□□□□ -0.7
SEC61BP60468 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC10.69□□□□□ -0.7
SEC61BP60468 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC10.69□□□□□ -0.7
SEC61BP60468 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC10.69□□□□□ -0.7
SEC61BP60468 KSR1P1-201ENST00000446298 240 ntBASIC10.69□□□□□ -0.7
SEC61BP60468 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC10.69□□□□□ -0.7
SEC61BP60468 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
SEC61BP60468 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC10.69□□□□□ -0.7
SEC61BP60468 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 AC010331.1-201ENST00000611423 582 ntBASIC10.69□□□□□ -0.7
SEC61BP60468 AC097493.4-201ENST00000641197 219 ntBASIC10.69□□□□□ -0.7
SEC61BP60468 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SEC61BP60468 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 AL049796.1-201ENST00000565336 1766 ntBASIC10.69□□□□□ -0.7
SEC61BP60468 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SEC61BP60468 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
SEC61BP60468 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC10.69□□□□□ -0.7
SEC61BP60468 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SEC61BP60468 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SEC61BP60468 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SEC61BP60468 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC10.68□□□□□ -0.7
SEC61BP60468 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SEC61BP60468 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
SEC61BP60468 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
SEC61BP60468 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SEC61BP60468 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SEC61BP60468 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
SEC61BP60468 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 F2R-202ENST00000505600 442 ntTSL 2 BASIC10.68□□□□□ -0.7
SEC61BP60468 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
SEC61BP60468 NUDT16P1-203ENST00000513809 620 ntBASIC10.68□□□□□ -0.7
SEC61BP60468 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC10.68□□□□□ -0.7
SEC61BP60468 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC10.68□□□□□ -0.7
SEC61BP60468 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC10.68□□□□□ -0.7
SEC61BP60468 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC10.68□□□□□ -0.7
SEC61BP60468 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SEC61BP60468 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC10.68□□□□□ -0.7
SEC61BP60468 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SEC61BP60468 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SEC61BP60468 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC10.68□□□□□ -0.7
SEC61BP60468 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms