Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC133561.5-201ENST00000635547 218 ntBASIC18.35■□□□□ 0.53
PER3P56645 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.35■□□□□ 0.53
PER3P56645 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PER3P56645 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PER3P56645 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PER3P56645 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.35■□□□□ 0.53
PER3P56645 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
PER3P56645 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PER3P56645 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.34■□□□□ 0.53
PER3P56645 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PER3P56645 AC239809.2-201ENST00000415381 517 ntBASIC18.34■□□□□ 0.53
PER3P56645 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.34■□□□□ 0.53
PER3P56645 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.34■□□□□ 0.53
PER3P56645 AL049637.2-201ENST00000641778 930 ntBASIC18.34■□□□□ 0.53
PER3P56645 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PER3P56645 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.34■□□□□ 0.53
PER3P56645 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PER3P56645 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.34■□□□□ 0.53
PER3P56645 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PER3P56645 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PER3P56645 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.33■□□□□ 0.53
PER3P56645 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.33■□□□□ 0.53
PER3P56645 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PER3P56645 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PER3P56645 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
PER3P56645 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.33■□□□□ 0.53
PER3P56645 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
PER3P56645 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PER3P56645 TSPY7P-201ENST00000431358 1114 ntBASIC18.33■□□□□ 0.52
PER3P56645 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.33■□□□□ 0.52
PER3P56645 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.33■□□□□ 0.52
PER3P56645 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PER3P56645 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PER3P56645 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PER3P56645 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.33■□□□□ 0.52
PER3P56645 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.32■□□□□ 0.52
PER3P56645 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.32■□□□□ 0.52
PER3P56645 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.32■□□□□ 0.52
PER3P56645 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.32■□□□□ 0.52
PER3P56645 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PER3P56645 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PER3P56645 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.32■□□□□ 0.52
PER3P56645 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.32■□□□□ 0.52
PER3P56645 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.32■□□□□ 0.52
PER3P56645 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.32■□□□□ 0.52
PER3P56645 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.32■□□□□ 0.52
PER3P56645 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PER3P56645 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.32■□□□□ 0.52
PER3P56645 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PER3P56645 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.32■□□□□ 0.52
PER3P56645 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PER3P56645 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PER3P56645 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.32■□□□□ 0.52
PER3P56645 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.31■□□□□ 0.52
PER3P56645 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PER3P56645 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PER3P56645 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PER3P56645 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms