Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 POU5F1P3-201ENST00000428824 1078 ntBASIC14.83□□□□□ -0.04
CMC4P56277 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.83□□□□□ -0.04
CMC4P56277 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.83□□□□□ -0.04
CMC4P56277 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.83□□□□□ -0.04
CMC4P56277 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CMC4P56277 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.83□□□□□ -0.04
CMC4P56277 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.83□□□□□ -0.04
CMC4P56277 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CMC4P56277 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CMC4P56277 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.83□□□□□ -0.04
CMC4P56277 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CMC4P56277 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.82□□□□□ -0.04
CMC4P56277 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CMC4P56277 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.82□□□□□ -0.04
CMC4P56277 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.82□□□□□ -0.04
CMC4P56277 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CMC4P56277 RPS2P52-201ENST00000469610 820 ntBASIC14.82□□□□□ -0.04
CMC4P56277 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CMC4P56277 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.82□□□□□ -0.04
CMC4P56277 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CMC4P56277 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
CMC4P56277 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CMC4P56277 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.81□□□□□ -0.04
CMC4P56277 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CMC4P56277 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.81□□□□□ -0.04
CMC4P56277 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.81□□□□□ -0.04
CMC4P56277 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CMC4P56277 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CMC4P56277 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CMC4P56277 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CMC4P56277 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.8□□□□□ -0.04
CMC4P56277 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 KRT18P29-201ENST00000397031 1267 ntBASIC14.8□□□□□ -0.04
CMC4P56277 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.8□□□□□ -0.04
CMC4P56277 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.8□□□□□ -0.04
CMC4P56277 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CMC4P56277 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.8□□□□□ -0.04
CMC4P56277 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CMC4P56277 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.8□□□□□ -0.04
CMC4P56277 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CMC4P56277 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CMC4P56277 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms