Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH11P55287 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH11P55287 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH11P55287 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CDH11P55287 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 DPP3P2-201ENST00000416030 1696 ntBASIC18.16■□□□□ 0.5
CDH11P55287 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CDH11P55287 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH11P55287 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH11P55287 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH11P55287 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CDH11P55287 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDH11P55287 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH11P55287 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDH11P55287 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH11P55287 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH11P55287 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH11P55287 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH11P55287 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH11P55287 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH11P55287 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH11P55287 AC098818.2-201ENST00000564925 2320 ntBASIC18.15■□□□□ 0.5
CDH11P55287 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH11P55287 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH11P55287 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH11P55287 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.15■□□□□ 0.5
CDH11P55287 TSPY6P-201ENST00000448518 926 ntBASIC18.15■□□□□ 0.5
CDH11P55287 AF201337.1-201ENST00000520239 748 ntBASIC18.15■□□□□ 0.5
CDH11P55287 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.15■□□□□ 0.5
CDH11P55287 AC105036.2-201ENST00000569468 176 ntBASIC18.15■□□□□ 0.5
CDH11P55287 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH11P55287 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH11P55287 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH11P55287 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDH11P55287 TMEM179-206ENST00000616017 1645 ntBASIC18.15■□□□□ 0.5
CDH11P55287 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH11P55287 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH11P55287 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH11P55287 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH11P55287 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH11P55287 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH11P55287 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.15■□□□□ 0.5
CDH11P55287 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDH11P55287 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDH11P55287 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDH11P55287 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CDH11P55287 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.14■□□□□ 0.49
CDH11P55287 CYP2T1P-201ENST00000432607 1285 ntBASIC18.14■□□□□ 0.49
CDH11P55287 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH11P55287 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDH11P55287 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH11P55287 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.14■□□□□ 0.49
CDH11P55287 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDH11P55287 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.14■□□□□ 0.49
CDH11P55287 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 AL691432.2-201ENST00000607222 2038 ntBASIC18.14■□□□□ 0.49
CDH11P55287 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CDH11P55287 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDH11P55287 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH11P55287 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH11P55287 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH11P55287 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH11P55287 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH11P55287 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CDH11P55287 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH11P55287 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH11P55287 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH11P55287 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH11P55287 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDH11P55287 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDH11P55287 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH11P55287 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.13■□□□□ 0.49
CDH11P55287 AC007322.4-201ENST00000509611 723 ntBASIC18.13■□□□□ 0.49
CDH11P55287 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDH11P55287 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDH11P55287 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH11P55287 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH11P55287 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH11P55287 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH11P55287 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms