Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDH6P55285 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDH6P55285 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.69■□□□□ 0.9
CDH6P55285 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH6P55285 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDH6P55285 GUSBP6-202ENST00000438529 1198 ntBASIC20.69■□□□□ 0.9
CDH6P55285 TSPY6P-201ENST00000448518 926 ntBASIC20.69■□□□□ 0.9
CDH6P55285 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.69■□□□□ 0.9
CDH6P55285 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH6P55285 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH6P55285 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH6P55285 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH6P55285 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH6P55285 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDH6P55285 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.69■□□□□ 0.9
CDH6P55285 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.69■□□□□ 0.9
CDH6P55285 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDH6P55285 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH6P55285 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDH6P55285 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.68■□□□□ 0.9
CDH6P55285 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDH6P55285 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH6P55285 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CDH6P55285 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH6P55285 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH6P55285 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH6P55285 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDH6P55285 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 DUSP5P2-201ENST00000426873 1033 ntBASIC20.67■□□□□ 0.9
CDH6P55285 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH6P55285 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH6P55285 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDH6P55285 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDH6P55285 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDH6P55285 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH6P55285 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.67■□□□□ 0.9
CDH6P55285 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDH6P55285 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH6P55285 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH6P55285 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH6P55285 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CDH6P55285 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH6P55285 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH6P55285 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH6P55285 AC092118.2-201ENST00000613495 667 ntBASIC20.66■□□□□ 0.9
CDH6P55285 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
CDH6P55285 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH6P55285 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDH6P55285 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH6P55285 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH6P55285 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH6P55285 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH6P55285 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH6P55285 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH6P55285 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH6P55285 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH6P55285 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH6P55285 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH6P55285 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH6P55285 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH6P55285 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDH6P55285 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH6P55285 AL109923.1-201ENST00000618799 583 ntBASIC20.65■□□□□ 0.9
CDH6P55285 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms