Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNA3P52797 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA3P52797 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA3P52797 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
EFNA3P52797 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
EFNA3P52797 AC239809.2-201ENST00000415381 517 ntBASIC18.66■□□□□ 0.58
EFNA3P52797 UBE2SP1-201ENST00000450587 669 ntBASIC18.66■□□□□ 0.58
EFNA3P52797 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
EFNA3P52797 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.66■□□□□ 0.58
EFNA3P52797 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA3P52797 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.66■□□□□ 0.58
EFNA3P52797 AL121829.2-201ENST00000620908 328 ntBASIC18.66■□□□□ 0.58
EFNA3P52797 FAM197Y4-202ENST00000622692 608 ntBASIC18.66■□□□□ 0.58
EFNA3P52797 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.66■□□□□ 0.58
EFNA3P52797 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
EFNA3P52797 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA3P52797 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA3P52797 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA3P52797 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
EFNA3P52797 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.65■□□□□ 0.58
EFNA3P52797 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
EFNA3P52797 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
EFNA3P52797 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA3P52797 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EFNA3P52797 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA3P52797 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA3P52797 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA3P52797 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFNA3P52797 AC008550.1-201ENST00000511500 884 ntBASIC18.65■□□□□ 0.58
EFNA3P52797 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.65■□□□□ 0.58
EFNA3P52797 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EFNA3P52797 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.65■□□□□ 0.58
EFNA3P52797 Z99916.2-201ENST00000604037 246 ntBASIC18.65■□□□□ 0.58
EFNA3P52797 AL391422.3-201ENST00000603791 2761 ntBASIC18.65■□□□□ 0.58
EFNA3P52797 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.65■□□□□ 0.58
EFNA3P52797 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.65■□□□□ 0.58
EFNA3P52797 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
EFNA3P52797 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.65■□□□□ 0.58
EFNA3P52797 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
EFNA3P52797 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
EFNA3P52797 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
EFNA3P52797 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.64■□□□□ 0.58
EFNA3P52797 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.64■□□□□ 0.57
EFNA3P52797 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFNA3P52797 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFNA3P52797 AL162377.1-201ENST00000618844 1793 ntBASIC18.64■□□□□ 0.57
EFNA3P52797 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.64■□□□□ 0.57
EFNA3P52797 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFNA3P52797 AL596275.1-201ENST00000423464 877 ntBASIC18.64■□□□□ 0.57
EFNA3P52797 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EFNA3P52797 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
EFNA3P52797 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFNA3P52797 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFNA3P52797 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
EFNA3P52797 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFNA3P52797 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFNA3P52797 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFNA3P52797 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFNA3P52797 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNA3P52797 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNA3P52797 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNA3P52797 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNA3P52797 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.63■□□□□ 0.57
EFNA3P52797 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.63■□□□□ 0.57
EFNA3P52797 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
EFNA3P52797 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFNA3P52797 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.63■□□□□ 0.57
EFNA3P52797 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
EFNA3P52797 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.63■□□□□ 0.57
EFNA3P52797 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.63■□□□□ 0.57
EFNA3P52797 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFNA3P52797 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EFNA3P52797 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFNA3P52797 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.63■□□□□ 0.57
EFNA3P52797 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.62■□□□□ 0.57
EFNA3P52797 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.62■□□□□ 0.57
EFNA3P52797 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.62■□□□□ 0.57
EFNA3P52797 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.62■□□□□ 0.57
EFNA3P52797 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.62■□□□□ 0.57
EFNA3P52797 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.62■□□□□ 0.57
EFNA3P52797 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.62■□□□□ 0.57
EFNA3P52797 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 BX119927.1-201ENST00000636596 1552 ntBASIC18.62■□□□□ 0.57
EFNA3P52797 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.62■□□□□ 0.57
EFNA3P52797 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.62■□□□□ 0.57
EFNA3P52797 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EFNA3P52797 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNA3P52797 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNA3P52797 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNA3P52797 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EFNA3P52797 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms