Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDR1P51861 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.68■■□□□ 1.06
CDR1P51861 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDR1P51861 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.67■■□□□ 1.06
CDR1P51861 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CDR1P51861 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CDR1P51861 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
CDR1P51861 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.67■■□□□ 1.06
CDR1P51861 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.67■■□□□ 1.06
CDR1P51861 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.67■■□□□ 1.06
CDR1P51861 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 AC090340.1-201ENST00000620778 4980 ntBASIC21.67■■□□□ 1.06
CDR1P51861 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDR1P51861 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDR1P51861 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.66■■□□□ 1.06
CDR1P51861 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDR1P51861 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.66■■□□□ 1.06
CDR1P51861 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.66■■□□□ 1.06
CDR1P51861 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.66■■□□□ 1.06
CDR1P51861 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDR1P51861 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.66■■□□□ 1.06
CDR1P51861 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDR1P51861 AC092368.3-202ENST00000574180 1591 ntBASIC21.65■■□□□ 1.06
CDR1P51861 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.65■■□□□ 1.06
CDR1P51861 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.65■■□□□ 1.06
CDR1P51861 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.65■■□□□ 1.06
CDR1P51861 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.65■■□□□ 1.06
CDR1P51861 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.65■■□□□ 1.06
CDR1P51861 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.65■■□□□ 1.06
CDR1P51861 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.65■■□□□ 1.06
CDR1P51861 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.65■■□□□ 1.06
CDR1P51861 AC066615.1-201ENST00000640911 628 ntBASIC21.65■■□□□ 1.06
CDR1P51861 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDR1P51861 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.65■■□□□ 1.06
CDR1P51861 AC087633.2-202ENST00000565166 1439 ntBASIC21.64■■□□□ 1.06
CDR1P51861 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDR1P51861 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.64■■□□□ 1.05
CDR1P51861 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDR1P51861 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
CDR1P51861 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDR1P51861 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.64■■□□□ 1.05
CDR1P51861 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDR1P51861 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDR1P51861 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDR1P51861 UNC93B5-201ENST00000530315 699 ntBASIC21.64■■□□□ 1.05
CDR1P51861 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.64■■□□□ 1.05
CDR1P51861 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDR1P51861 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.64■■□□□ 1.05
CDR1P51861 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDR1P51861 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDR1P51861 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CDR1P51861 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDR1P51861 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDR1P51861 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDR1P51861 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDR1P51861 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDR1P51861 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDR1P51861 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDR1P51861 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.63■■□□□ 1.05
CDR1P51861 AC098590.1-201ENST00000468126 897 ntBASIC21.63■■□□□ 1.05
CDR1P51861 RPS2P52-201ENST00000469610 820 ntBASIC21.63■■□□□ 1.05
CDR1P51861 AC233263.1-201ENST00000578059 224 ntBASIC21.63■■□□□ 1.05
CDR1P51861 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.63■■□□□ 1.05
CDR1P51861 AL356652.1-201ENST00000615962 565 ntBASIC21.63■■□□□ 1.05
CDR1P51861 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDR1P51861 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms