Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.13■■□□□ 1.13
CPT1AP50416 KRT18P35-201ENST00000510488 1269 ntBASIC22.13■■□□□ 1.13
CPT1AP50416 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.13■■□□□ 1.13
CPT1AP50416 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.13■■□□□ 1.13
CPT1AP50416 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CPT1AP50416 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CPT1AP50416 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CPT1AP50416 AC006128.1-201ENST00000624704 1661 ntBASIC22.13■■□□□ 1.13
CPT1AP50416 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CPT1AP50416 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CPT1AP50416 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CPT1AP50416 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CPT1AP50416 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CPT1AP50416 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CPT1AP50416 AC133561.1-201ENST00000568600 2415 ntBASIC22.12■■□□□ 1.13
CPT1AP50416 TFP1-202ENST00000475455 1573 ntBASIC22.12■■□□□ 1.13
CPT1AP50416 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC22.12■■□□□ 1.13
CPT1AP50416 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CPT1AP50416 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CPT1AP50416 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CPT1AP50416 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CPT1AP50416 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.12■■□□□ 1.13
CPT1AP50416 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.12■■□□□ 1.13
CPT1AP50416 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.12■■□□□ 1.13
CPT1AP50416 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CPT1AP50416 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CPT1AP50416 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.11■■□□□ 1.13
CPT1AP50416 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CPT1AP50416 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.11■■□□□ 1.13
CPT1AP50416 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.11■■□□□ 1.13
CPT1AP50416 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.11■■□□□ 1.13
CPT1AP50416 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPT1AP50416 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPT1AP50416 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.1■■□□□ 1.13
CPT1AP50416 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPT1AP50416 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CPT1AP50416 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPT1AP50416 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.1■■□□□ 1.13
CPT1AP50416 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.1■■□□□ 1.13
CPT1AP50416 AL137013.1-201ENST00000432946 1228 ntBASIC22.1■■□□□ 1.13
CPT1AP50416 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.1■■□□□ 1.13
CPT1AP50416 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CPT1AP50416 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.1■■□□□ 1.13
CPT1AP50416 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.1■■□□□ 1.13
CPT1AP50416 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.1■■□□□ 1.13
CPT1AP50416 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CPT1AP50416 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.1■■□□□ 1.13
CPT1AP50416 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPT1AP50416 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.1■■□□□ 1.13
CPT1AP50416 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.1■■□□□ 1.13
CPT1AP50416 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPT1AP50416 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPT1AP50416 AC018553.1-201ENST00000616682 1458 ntBASIC22.09■■□□□ 1.13
CPT1AP50416 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
CPT1AP50416 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CPT1AP50416 AF106564.1-201ENST00000607058 2553 ntBASIC22.09■■□□□ 1.13
CPT1AP50416 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPT1AP50416 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPT1AP50416 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPT1AP50416 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.09■■□□□ 1.13
CPT1AP50416 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CPT1AP50416 TERF1P1-201ENST00000311003 1181 ntBASIC22.09■■□□□ 1.13
CPT1AP50416 ARMC10P1-201ENST00000313754 855 ntBASIC22.09■■□□□ 1.13
CPT1AP50416 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.09■■□□□ 1.13
CPT1AP50416 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.09■■□□□ 1.13
CPT1AP50416 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
CPT1AP50416 KRT18P16-201ENST00000510337 1294 ntBASIC22.09■■□□□ 1.13
CPT1AP50416 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.09■■□□□ 1.13
CPT1AP50416 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.09■■□□□ 1.13
CPT1AP50416 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CPT1AP50416 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.09■■□□□ 1.13
CPT1AP50416 DGCR10-201ENST00000609839 495 ntBASIC22.09■■□□□ 1.13
CPT1AP50416 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPT1AP50416 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CPT1AP50416 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.09■■□□□ 1.13
CPT1AP50416 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPT1AP50416 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CPT1AP50416 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPT1AP50416 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.08■■□□□ 1.13
CPT1AP50416 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPT1AP50416 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPT1AP50416 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPT1AP50416 TUBB8P6-201ENST00000436895 1288 ntBASIC22.08■■□□□ 1.13
CPT1AP50416 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.08■■□□□ 1.13
CPT1AP50416 SLC25A3P1-201ENST00000443844 931 ntBASIC22.08■■□□□ 1.13
CPT1AP50416 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.08■■□□□ 1.13
CPT1AP50416 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
CPT1AP50416 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CPT1AP50416 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CPT1AP50416 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CPT1AP50416 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms