Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.26■□□□□ 0.67
KRT6CP48668 AC125437.2-201ENST00000625180 2167 ntBASIC19.26■□□□□ 0.67
KRT6CP48668 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
KRT6CP48668 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.25■□□□□ 0.67
KRT6CP48668 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT6CP48668 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT6CP48668 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT6CP48668 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT6CP48668 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
KRT6CP48668 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT6CP48668 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT6CP48668 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT6CP48668 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT6CP48668 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT6CP48668 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT6CP48668 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
KRT6CP48668 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
KRT6CP48668 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
KRT6CP48668 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
KRT6CP48668 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.25■□□□□ 0.67
KRT6CP48668 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.25■□□□□ 0.67
KRT6CP48668 AC010980.2-201ENST00000587099 1412 ntBASIC19.25■□□□□ 0.67
KRT6CP48668 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
KRT6CP48668 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT6CP48668 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT6CP48668 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT6CP48668 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT6CP48668 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KRT6CP48668 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 HLA-G-202ENST00000376815 851 ntBASIC19.24■□□□□ 0.67
KRT6CP48668 HLA-G-203ENST00000376818 1127 ntBASIC19.24■□□□□ 0.67
KRT6CP48668 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KRT6CP48668 AL355472.2-201ENST00000422958 438 ntBASIC19.24■□□□□ 0.67
KRT6CP48668 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT6CP48668 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.24■□□□□ 0.67
KRT6CP48668 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT6CP48668 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
KRT6CP48668 AC022517.1-201ENST00000592429 346 ntBASIC19.24■□□□□ 0.67
KRT6CP48668 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT6CP48668 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.24■□□□□ 0.67
KRT6CP48668 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KRT6CP48668 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT6CP48668 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.23■□□□□ 0.67
KRT6CP48668 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 AL512625.2-201ENST00000417533 625 ntBASIC19.23■□□□□ 0.67
KRT6CP48668 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.23■□□□□ 0.67
KRT6CP48668 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
KRT6CP48668 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.23■□□□□ 0.67
KRT6CP48668 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
KRT6CP48668 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KRT6CP48668 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.22■□□□□ 0.67
KRT6CP48668 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.22■□□□□ 0.67
KRT6CP48668 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
KRT6CP48668 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KRT6CP48668 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
KRT6CP48668 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
KRT6CP48668 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT6CP48668 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT6CP48668 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT6CP48668 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.22■□□□□ 0.67
KRT6CP48668 AC005181.1-201ENST00000604782 1256 ntBASIC19.22■□□□□ 0.67
KRT6CP48668 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT6CP48668 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KRT6CP48668 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms