Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CXCL12P48061 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.88■□□□□ 0.77
CXCL12P48061 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.88■□□□□ 0.77
CXCL12P48061 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.88■□□□□ 0.77
CXCL12P48061 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.88■□□□□ 0.77
CXCL12P48061 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.88■□□□□ 0.77
CXCL12P48061 KRT18P56-201ENST00000507275 550 ntBASIC19.88■□□□□ 0.77
CXCL12P48061 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.88■□□□□ 0.77
CXCL12P48061 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.88■□□□□ 0.77
CXCL12P48061 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.88■□□□□ 0.77
CXCL12P48061 AP000692.2-201ENST00000608391 879 ntBASIC19.88■□□□□ 0.77
CXCL12P48061 AC116562.4-202ENST00000641738 218 ntBASIC19.88■□□□□ 0.77
CXCL12P48061 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CXCL12P48061 AC244015.2-201ENST00000616358 1861 ntBASIC19.88■□□□□ 0.77
CXCL12P48061 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL12P48061 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL12P48061 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL12P48061 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CXCL12P48061 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.87■□□□□ 0.77
CXCL12P48061 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CXCL12P48061 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.87■□□□□ 0.77
CXCL12P48061 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.87■□□□□ 0.77
CXCL12P48061 AL031133.1-201ENST00000406807 723 ntBASIC19.87■□□□□ 0.77
CXCL12P48061 TUBB8P6-201ENST00000436895 1288 ntBASIC19.87■□□□□ 0.77
CXCL12P48061 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL12P48061 YBX1P10-201ENST00000444752 975 ntBASIC19.87■□□□□ 0.77
CXCL12P48061 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.87■□□□□ 0.77
CXCL12P48061 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.87■□□□□ 0.77
CXCL12P48061 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
CXCL12P48061 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.87■□□□□ 0.77
CXCL12P48061 MYC-208ENST00000641036 567 ntBASIC19.87■□□□□ 0.77
CXCL12P48061 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL12P48061 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CXCL12P48061 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.87■□□□□ 0.77
CXCL12P48061 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL12P48061 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.87■□□□□ 0.77
CXCL12P48061 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL12P48061 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CXCL12P48061 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.87■□□□□ 0.77
CXCL12P48061 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CXCL12P48061 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CXCL12P48061 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.86■□□□□ 0.77
CXCL12P48061 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.86■□□□□ 0.77
CXCL12P48061 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.86■□□□□ 0.77
CXCL12P48061 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CXCL12P48061 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CXCL12P48061 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.86■□□□□ 0.77
CXCL12P48061 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CXCL12P48061 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CXCL12P48061 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.86■□□□□ 0.77
CXCL12P48061 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.85■□□□□ 0.77
CXCL12P48061 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CXCL12P48061 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CXCL12P48061 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.85■□□□□ 0.77
CXCL12P48061 TSPY5P-201ENST00000426936 936 ntBASIC19.85■□□□□ 0.77
CXCL12P48061 CCR12P-201ENST00000446203 998 ntBASIC19.85■□□□□ 0.77
CXCL12P48061 KRT18P16-201ENST00000510337 1294 ntBASIC19.85■□□□□ 0.77
CXCL12P48061 KRT126P-201ENST00000549467 1181 ntBASIC19.85■□□□□ 0.77
CXCL12P48061 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CXCL12P48061 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.85■□□□□ 0.77
CXCL12P48061 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.85■□□□□ 0.77
CXCL12P48061 AL138966.2-201ENST00000621997 464 ntBASIC19.85■□□□□ 0.77
CXCL12P48061 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CXCL12P48061 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CXCL12P48061 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.85■□□□□ 0.77
CXCL12P48061 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CXCL12P48061 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms