Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX5P45973 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.07■□□□□ 0.32
CBX5P45973 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CBX5P45973 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX5P45973 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CBX5P45973 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 AL356309.3-201ENST00000624132 1934 ntBASIC17.07■□□□□ 0.32
CBX5P45973 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CBX5P45973 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.07■□□□□ 0.32
CBX5P45973 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CBX5P45973 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CBX5P45973 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CBX5P45973 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX5P45973 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX5P45973 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.06■□□□□ 0.32
CBX5P45973 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX5P45973 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.06■□□□□ 0.32
CBX5P45973 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX5P45973 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX5P45973 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.06■□□□□ 0.32
CBX5P45973 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CBX5P45973 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX5P45973 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CBX5P45973 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.05■□□□□ 0.32
CBX5P45973 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CBX5P45973 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.05■□□□□ 0.32
CBX5P45973 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CBX5P45973 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX5P45973 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.05■□□□□ 0.32
CBX5P45973 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.05■□□□□ 0.32
CBX5P45973 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.05■□□□□ 0.32
CBX5P45973 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CBX5P45973 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CBX5P45973 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CBX5P45973 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CBX5P45973 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CBX5P45973 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CBX5P45973 OR6D1P-202ENST00000641007 5290 ntBASIC17.05■□□□□ 0.32
CBX5P45973 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX5P45973 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX5P45973 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX5P45973 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.04■□□□□ 0.32
CBX5P45973 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX5P45973 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CBX5P45973 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.04■□□□□ 0.32
CBX5P45973 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CBX5P45973 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CBX5P45973 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.04■□□□□ 0.32
CBX5P45973 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CBX5P45973 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CBX5P45973 AC138907.5-202ENST00000569484 235 ntBASIC17.04■□□□□ 0.32
CBX5P45973 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CBX5P45973 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms