Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
MTHFRP42898 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
MTHFRP42898 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
MTHFRP42898 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MTHFRP42898 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MTHFRP42898 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.86■□□□□ 0.93
MTHFRP42898 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.86■□□□□ 0.93
MTHFRP42898 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.86■□□□□ 0.93
MTHFRP42898 AL031985.4-201ENST00000642138 673 ntBASIC20.86■□□□□ 0.93
MTHFRP42898 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MTHFRP42898 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.86■□□□□ 0.93
MTHFRP42898 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.86■□□□□ 0.93
MTHFRP42898 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MTHFRP42898 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
MTHFRP42898 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.85■□□□□ 0.93
MTHFRP42898 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
MTHFRP42898 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.85■□□□□ 0.93
MTHFRP42898 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
MTHFRP42898 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.85■□□□□ 0.93
MTHFRP42898 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.85■□□□□ 0.93
MTHFRP42898 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
MTHFRP42898 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.85■□□□□ 0.93
MTHFRP42898 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 C2orf69P3-201ENST00000565542 1120 ntBASIC20.85■□□□□ 0.93
MTHFRP42898 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.85■□□□□ 0.93
MTHFRP42898 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
MTHFRP42898 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.85■□□□□ 0.93
MTHFRP42898 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
MTHFRP42898 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
MTHFRP42898 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.85■□□□□ 0.93
MTHFRP42898 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.84■□□□□ 0.93
MTHFRP42898 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.84■□□□□ 0.93
MTHFRP42898 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.84■□□□□ 0.93
MTHFRP42898 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MTHFRP42898 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MTHFRP42898 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MTHFRP42898 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.84■□□□□ 0.93
MTHFRP42898 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.84■□□□□ 0.93
MTHFRP42898 ATP5G1P1-201ENST00000448724 379 ntBASIC20.84■□□□□ 0.93
MTHFRP42898 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.84■□□□□ 0.93
MTHFRP42898 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.84■□□□□ 0.93
MTHFRP42898 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MTHFRP42898 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.84■□□□□ 0.93
MTHFRP42898 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.84■□□□□ 0.93
MTHFRP42898 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
MTHFRP42898 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MTHFRP42898 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.84■□□□□ 0.93
MTHFRP42898 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MTHFRP42898 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.84■□□□□ 0.93
MTHFRP42898 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MTHFRP42898 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MTHFRP42898 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MTHFRP42898 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MTHFRP42898 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MTHFRP42898 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.84■□□□□ 0.93
MTHFRP42898 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MTHFRP42898 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MTHFRP42898 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.83■□□□□ 0.93
MTHFRP42898 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MTHFRP42898 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MTHFRP42898 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MTHFRP42898 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
MTHFRP42898 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MTHFRP42898 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
MTHFRP42898 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
MTHFRP42898 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.83■□□□□ 0.93
MTHFRP42898 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
MTHFRP42898 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.83■□□□□ 0.93
MTHFRP42898 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.83■□□□□ 0.92
MTHFRP42898 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
MTHFRP42898 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
MTHFRP42898 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
MTHFRP42898 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MTHFRP42898 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MTHFRP42898 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
MTHFRP42898 FSCN1P1-201ENST00000568912 1481 ntBASIC20.82■□□□□ 0.92
MTHFRP42898 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MTHFRP42898 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MTHFRP42898 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.82■□□□□ 0.92
MTHFRP42898 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.82■□□□□ 0.92
MTHFRP42898 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
MTHFRP42898 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.82■□□□□ 0.92
MTHFRP42898 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MTHFRP42898 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MTHFRP42898 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MTHFRP42898 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MTHFRP42898 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.81■□□□□ 0.92
MTHFRP42898 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MTHFRP42898 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.81■□□□□ 0.92
MTHFRP42898 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.81■□□□□ 0.92
MTHFRP42898 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MTHFRP42898 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms