Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HLA-L-209ENST00000420110 1011 ntBASIC20.11■□□□□ 0.81
HADHAP40939 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HADHAP40939 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.11■□□□□ 0.81
HADHAP40939 MIR4758-201ENST00000577688 71 ntBASIC20.11■□□□□ 0.81
HADHAP40939 AL109923.1-201ENST00000618799 583 ntBASIC20.11■□□□□ 0.81
HADHAP40939 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.11■□□□□ 0.81
HADHAP40939 AC007952.6-201ENST00000573168 2673 ntBASIC20.11■□□□□ 0.81
HADHAP40939 AC003957.1-201ENST00000625108 2673 ntBASIC20.11■□□□□ 0.81
HADHAP40939 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HADHAP40939 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HADHAP40939 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HADHAP40939 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HADHAP40939 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.1■□□□□ 0.81
HADHAP40939 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HADHAP40939 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
HADHAP40939 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HADHAP40939 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.1■□□□□ 0.81
HADHAP40939 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
HADHAP40939 TMEM179-206ENST00000616017 1645 ntBASIC20.1■□□□□ 0.81
HADHAP40939 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.1■□□□□ 0.81
HADHAP40939 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HADHAP40939 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
HADHAP40939 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HADHAP40939 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HADHAP40939 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
HADHAP40939 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.1■□□□□ 0.81
HADHAP40939 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.1■□□□□ 0.81
HADHAP40939 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HADHAP40939 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HADHAP40939 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.1■□□□□ 0.81
HADHAP40939 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.1■□□□□ 0.81
HADHAP40939 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HADHAP40939 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.09■□□□□ 0.81
HADHAP40939 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
HADHAP40939 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HADHAP40939 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.09■□□□□ 0.81
HADHAP40939 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HADHAP40939 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.09■□□□□ 0.81
HADHAP40939 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HADHAP40939 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
HADHAP40939 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.09■□□□□ 0.81
HADHAP40939 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.08■□□□□ 0.81
HADHAP40939 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
HADHAP40939 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
HADHAP40939 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.08■□□□□ 0.81
HADHAP40939 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HADHAP40939 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.08■□□□□ 0.81
HADHAP40939 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HADHAP40939 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HADHAP40939 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HADHAP40939 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HADHAP40939 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HADHAP40939 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HADHAP40939 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HADHAP40939 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HADHAP40939 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HADHAP40939 BX119927.1-201ENST00000636596 1552 ntBASIC20.08■□□□□ 0.8
HADHAP40939 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.07■□□□□ 0.8
HADHAP40939 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HADHAP40939 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
HADHAP40939 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.07■□□□□ 0.8
HADHAP40939 PTBP1P-201ENST00000554374 1601 ntBASIC20.07■□□□□ 0.8
HADHAP40939 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HADHAP40939 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HADHAP40939 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.07■□□□□ 0.8
HADHAP40939 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.07■□□□□ 0.8
HADHAP40939 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
HADHAP40939 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.07■□□□□ 0.8
HADHAP40939 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HADHAP40939 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms