Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC231657.2-201ENST00000624556 255 ntBASIC21.73■■□□□ 1.07
KRT9P35527 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KRT9P35527 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT9P35527 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
KRT9P35527 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT9P35527 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT9P35527 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
KRT9P35527 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT9P35527 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT9P35527 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT9P35527 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT9P35527 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
KRT9P35527 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.72■■□□□ 1.07
KRT9P35527 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.72■■□□□ 1.07
KRT9P35527 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT9P35527 AC068338.2-201ENST00000563278 1430 ntBASIC21.72■■□□□ 1.07
KRT9P35527 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.71■■□□□ 1.07
KRT9P35527 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.71■■□□□ 1.07
KRT9P35527 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT9P35527 AC007322.1-201ENST00000426983 750 ntBASIC21.71■■□□□ 1.07
KRT9P35527 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.71■■□□□ 1.07
KRT9P35527 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
KRT9P35527 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
KRT9P35527 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.71■■□□□ 1.07
KRT9P35527 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.71■■□□□ 1.07
KRT9P35527 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.71■■□□□ 1.07
KRT9P35527 IKBKGP1-201ENST00000612193 1073 ntBASIC21.71■■□□□ 1.07
KRT9P35527 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 AC087633.2-202ENST00000565166 1439 ntBASIC21.71■■□□□ 1.07
KRT9P35527 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KRT9P35527 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.7■■□□□ 1.07
KRT9P35527 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT9P35527 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KRT9P35527 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT9P35527 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
KRT9P35527 PGM5P4-201ENST00000421970 445 ntBASIC21.7■■□□□ 1.06
KRT9P35527 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.7■■□□□ 1.06
KRT9P35527 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
KRT9P35527 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.7■■□□□ 1.06
KRT9P35527 AC092437.1-201ENST00000624794 1048 ntBASIC21.7■■□□□ 1.06
KRT9P35527 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.7■■□□□ 1.06
KRT9P35527 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT9P35527 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT9P35527 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KRT9P35527 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
KRT9P35527 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
KRT9P35527 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT9P35527 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT9P35527 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT9P35527 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT9P35527 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT9P35527 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT9P35527 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.69■■□□□ 1.06
KRT9P35527 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.69■■□□□ 1.06
KRT9P35527 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT9P35527 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT9P35527 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT9P35527 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.69■■□□□ 1.06
KRT9P35527 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.69■■□□□ 1.06
KRT9P35527 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT9P35527 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KRT9P35527 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KRT9P35527 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KRT9P35527 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
KRT9P35527 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT9P35527 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT9P35527 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT9P35527 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT9P35527 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
KRT9P35527 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
KRT9P35527 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.68■■□□□ 1.06
KRT9P35527 AC004911.1-201ENST00000416316 871 ntBASIC21.68■■□□□ 1.06
KRT9P35527 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.68■■□□□ 1.06
KRT9P35527 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KRT9P35527 RARRES2P4-201ENST00000514074 484 ntBASIC21.68■■□□□ 1.06
KRT9P35527 AL137784.2-201ENST00000607332 1000 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms