Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.82■□□□□ 0.28
COL8A2P25067 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 MIR718-201ENST00000390190 70 ntBASIC16.82■□□□□ 0.28
COL8A2P25067 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.82■□□□□ 0.28
COL8A2P25067 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.82■□□□□ 0.28
COL8A2P25067 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.82■□□□□ 0.28
COL8A2P25067 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
COL8A2P25067 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
COL8A2P25067 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.82■□□□□ 0.28
COL8A2P25067 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COL8A2P25067 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.81■□□□□ 0.28
COL8A2P25067 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL8A2P25067 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL8A2P25067 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL8A2P25067 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL8A2P25067 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL8A2P25067 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.81■□□□□ 0.28
COL8A2P25067 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL8A2P25067 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL8A2P25067 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.81■□□□□ 0.28
COL8A2P25067 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
COL8A2P25067 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.81■□□□□ 0.28
COL8A2P25067 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
COL8A2P25067 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.8■□□□□ 0.28
COL8A2P25067 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.8■□□□□ 0.28
COL8A2P25067 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.8■□□□□ 0.28
COL8A2P25067 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COL8A2P25067 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.8■□□□□ 0.28
COL8A2P25067 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.8■□□□□ 0.28
COL8A2P25067 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.8■□□□□ 0.28
COL8A2P25067 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.8■□□□□ 0.28
COL8A2P25067 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.8■□□□□ 0.28
COL8A2P25067 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
COL8A2P25067 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL8A2P25067 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
COL8A2P25067 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.79■□□□□ 0.28
COL8A2P25067 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.79■□□□□ 0.28
COL8A2P25067 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.79■□□□□ 0.28
COL8A2P25067 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.79■□□□□ 0.28
COL8A2P25067 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.79■□□□□ 0.28
COL8A2P25067 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.79■□□□□ 0.28
COL8A2P25067 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.79■□□□□ 0.28
COL8A2P25067 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.79■□□□□ 0.28
COL8A2P25067 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.79■□□□□ 0.28
COL8A2P25067 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.79■□□□□ 0.28
COL8A2P25067 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.79■□□□□ 0.28
COL8A2P25067 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL8A2P25067 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.78■□□□□ 0.28
COL8A2P25067 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
COL8A2P25067 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL8A2P25067 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.78■□□□□ 0.28
COL8A2P25067 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL8A2P25067 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.78■□□□□ 0.28
COL8A2P25067 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.78■□□□□ 0.28
COL8A2P25067 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.78■□□□□ 0.28
COL8A2P25067 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.78■□□□□ 0.28
COL8A2P25067 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL8A2P25067 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.78■□□□□ 0.28
COL8A2P25067 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.78■□□□□ 0.28
COL8A2P25067 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL8A2P25067 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms