Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 COPZ1-203ENST00000548076 367 ntTSL 58.56□□□□□ -1.041e-7■■■■□ 22.9
RPS3P23396 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.911e-7■■■■□ 22.9
RPS3P23396 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.7■□□□□ 0.91e-7■■■■□ 22.9
RPS3P23396 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.571e-7■■■■□ 22.9
RPS3P23396 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.461e-7■■■■□ 22.9
RPS3P23396 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.431e-7■■■■□ 22.9
RPS3P23396 USMG5-202ENST00000337003 560 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.553e-7■■■■□ 22.9
RPS3P23396 USMG5-204ENST00000369815 626 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.743e-7■■■■□ 22.9
RPS3P23396 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.53e-7■■■■□ 22.9
RPS3P23396 SEC13-218ENST00000490283 740 ntTSL 216.9■□□□□ 0.36e-10■■■■□ 22.9
RPS3P23396 NDUFB4-204ENST00000491335 558 ntTSL 218.04■□□□□ 0.489e-13■■■■□ 22.9
RPS3P23396 NDUFB4-203ENST00000485064 1426 ntTSL 1 (best) BASIC9.62□□□□□ -0.879e-13■■■■□ 22.9
RPS3P23396 NDUFB4-205ENST00000492739 309 ntTSL 2 BASIC9.45□□□□□ -0.99e-13■■■■□ 22.9
RPS3P23396 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.299e-13■■■■□ 22.9
RPS3P23396 HSD17B10-205ENST00000495986 666 ntTSL 519.25■□□□□ 0.673e-6■■■■□ 22.9
RPS3P23396 MED28-203ENST00000503945 879 ntTSL 1 (best)11.52□□□□□ -0.571e-6■■■■□ 22.9
RPS3P23396 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.271e-6■■■■□ 22.9
RPS3P23396 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.081e-7■■■■□ 22.8
RPS3P23396 CCT3-206ENST00000368262 2048 ntTSL 213.64□□□□□ -0.231e-7■■■■□ 22.8
RPS3P23396 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.87□□□□□ -0.351e-7■■■■□ 22.8
RPS3P23396 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.67□□□□□ -0.381e-7■■■■□ 22.8
RPS3P23396 CCT3-203ENST00000368258 1885 ntTSL 211.84□□□□□ -0.511e-7■■■■□ 22.8
RPS3P23396 ARHGAP4-224ENST00000494813 1939 ntTSL 521.3■■□□□ 11e-7■■■■□ 22.8
RPS3P23396 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.891e-7■■■■□ 22.8
RPS3P23396 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.793e-16■■■■□ 22.8
RPS3P23396 GMPPA-209ENST00000480034 571 ntTSL 219.97■□□□□ 0.792e-10■■■■□ 22.8
RPS3P23396 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.27■□□□□ 0.671e-7■■■■□ 22.8
RPS3P23396 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.633e-10■■■■□ 22.8
RPS3P23396 ATF5-203ENST00000596658 722 ntTSL 217.97■□□□□ 0.475e-16■■■■□ 22.8
RPS3P23396 NAA10-209ENST00000466877 1080 ntTSL 1 (best)17.33■□□□□ 0.361e-7■■■■□ 22.8
RPS3P23396 NAA10-207ENST00000460996 908 ntTSL 217.3■□□□□ 0.361e-7■■■■□ 22.8
RPS3P23396 ATF5-204ENST00000597227 828 ntTSL 315.93■□□□□ 0.143e-16■■■■□ 22.8
RPS3P23396 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.126e-11■■■■□ 22.8
RPS3P23396 ATP6V1G1-202ENST00000473413 470 ntTSL 215.36■□□□□ 0.051e-7■■■■□ 22.8
RPS3P23396 NAA10-215ENST00000484950 873 ntTSL 215.09■□□□□ 0.011e-7■■■■□ 22.8
RPS3P23396 NAA10-214ENST00000482485 1075 ntTSL 215.01□□□□□ -0.011e-7■■■■□ 22.8
RPS3P23396 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15□□□□□ -0.013e-16■■■■□ 22.8
RPS3P23396 MARS-211ENST00000548202 796 ntTSL 214.79□□□□□ -0.046e-11■■■■□ 22.8
RPS3P23396 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.33□□□□□ -0.121e-7■■■■□ 22.8
RPS3P23396 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.33□□□□□ -0.121e-7■■■■□ 22.8
RPS3P23396 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.141e-7■■■■□ 22.8
RPS3P23396 GMPPA-211ENST00000481170 4942 ntTSL 212.55□□□□□ -0.41e-7■■■■□ 22.8
RPS3P23396 NAA10-205ENST00000393712 908 ntTSL 5 BASIC12.33□□□□□ -0.441e-7■■■■□ 22.8
RPS3P23396 PRRC2C-208ENST00000476522 1931 ntTSL 512.03□□□□□ -0.481e-7■■■■□ 22.8
RPS3P23396 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.581e-7■■■■□ 22.8
RPS3P23396 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.611e-7■■■■□ 22.8
RPS3P23396 ATXN7L3B-201ENST00000519948 7604 ntAPPRIS P1 BASIC11.24□□□□□ -0.611e-7■■■■□ 22.8
RPS3P23396 GMPPA-212ENST00000496536 302 ntTSL 510.4□□□□□ -0.742e-10■■■■□ 22.8
RPS3P23396 MAT1A-202ENST00000455001 435 ntTSL 510.3□□□□□ -0.761e-7■■■■□ 22.8
RPS3P23396 EIF3D-204ENST00000426531 710 ntTSL 29.52□□□□□ -0.891e-7■■■■□ 22.8
RPS3P23396 PRRC2C-206ENST00000467601 717 ntTSL 29.32□□□□□ -0.921e-7■■■■□ 22.8
RPS3P23396 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC9.2□□□□□ -0.941e-7■■■■□ 22.8
RPS3P23396 VCL-204ENST00000472585 556 ntTSL 28.77□□□□□ -1.017e-23■■■■□ 22.8
RPS3P23396 EIF3D-208ENST00000458572 883 ntTSL 38.44□□□□□ -1.061e-7■■■■□ 22.8
RPS3P23396 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.091e-7■■■■□ 22.8
RPS3P23396 NDUFS3-205ENST00000527178 269 ntTSL 28.07□□□□□ -1.121e-7■■■■□ 22.8
RPS3P23396 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.91□□□□□ -1.141e-7■■■■□ 22.8
RPS3P23396 AHSA1-203ENST00000553374 763 ntTSL 27.15□□□□□ -1.261e-7■■■■□ 22.8
RPS3P23396 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.351e-7■■■■□ 22.8
RPS3P23396 HMGCR-212ENST00000514315 603 ntTSL 36.47□□□□□ -1.376e-7■■■■□ 22.8
RPS3P23396 EIF3D-210ENST00000462794 764 ntTSL 26.13□□□□□ -1.438e-19■■■■□ 22.8
RPS3P23396 ADH6-207ENST00000512708 511 ntTSL 40.77□□□□□ -2.293e-6■■■■□ 22.8
RPS3P23396 BSG-210ENST00000576925 611 ntTSL 216.26■□□□□ 0.192e-21■■■■□ 22.8
RPS3P23396 THBS1-207ENST00000559746 563 ntTSL 23.57□□□□□ -1.841e-6■■■■□ 22.8
RPS3P23396 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC12.52□□□□□ -0.411e-16■■■■□ 22.8
RPS3P23396 HMBS-215ENST00000542822 936 ntTSL 519.3■□□□□ 0.687e-7■■■■□ 22.8
RPS3P23396 HMBS-211ENST00000539986 1155 ntTSL 312.23□□□□□ -0.457e-7■■■■□ 22.8
RPS3P23396 HMBS-205ENST00000535253 755 ntTSL 412.23□□□□□ -0.457e-7■■■■□ 22.8
RPS3P23396 HMBS-206ENST00000535793 832 ntTSL 58.53□□□□□ -1.047e-7■■■■□ 22.8
RPS3P23396 CARHSP1-215ENST00000570125 681 ntTSL 427.56■■■□□ 21e-7■■■■□ 22.8
RPS3P23396 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.744e-6■■■■□ 22.8
RPS3P23396 AXIN1-205ENST00000481769 1089 ntTSL 325.42■■□□□ 1.663e-11■■■■□ 22.8
RPS3P23396 EIF6-208ENST00000462894 453 ntTSL 324.78■■□□□ 1.562e-6■■■■□ 22.8
RPS3P23396 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.83■■□□□ 1.413e-6■■■■□ 22.8
RPS3P23396 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.7■■□□□ 1.384e-6■■■■□ 22.8
RPS3P23396 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.96■■□□□ 1.274e-6■■■■□ 22.8
RPS3P23396 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.174e-18■■■■□ 22.8
RPS3P23396 TOR1AIP1-209ENST00000529091 587 ntTSL 421.43■■□□□ 1.024e-6■■■■□ 22.8
RPS3P23396 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.19■□□□□ 0.981e-6■■■■□ 22.8
RPS3P23396 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.04■□□□□ 0.969e-9■■■■□ 22.8
RPS3P23396 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.951e-6■■■■□ 22.8
RPS3P23396 EIF4G2-207ENST00000525995 592 ntTSL 420.75■□□□□ 0.912e-7■■■■□ 22.8
RPS3P23396 EIF6-207ENST00000456600 551 ntTSL 320.6■□□□□ 0.893e-6■■■■□ 22.8
RPS3P23396 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.45■□□□□ 0.864e-6■■■■□ 22.8
RPS3P23396 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.853e-11■■■■□ 22.8
RPS3P23396 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.853e-11■■■■□ 22.8
RPS3P23396 EIF4G2-203ENST00000524932 1286 ntTSL 520.12■□□□□ 0.811e-7■■■■□ 22.8
RPS3P23396 PTPA-208ENST00000411917 738 ntTSL 320.08■□□□□ 0.814e-6■■■■□ 22.8
RPS3P23396 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.793e-11■■■■□ 22.8
RPS3P23396 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.744e-6■■■■□ 22.8
RPS3P23396 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.724e-6■■■■□ 22.8
RPS3P23396 MKNK2-205ENST00000586828 1503 ntTSL 219.56■□□□□ 0.724e-6■■■■□ 22.8
RPS3P23396 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.74e-6■■■■□ 22.8
RPS3P23396 CARHSP1-206ENST00000563815 1913 ntTSL 219.38■□□□□ 0.692e-7■■■■□ 22.8
RPS3P23396 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.99■□□□□ 0.634e-6■■■■□ 22.8
RPS3P23396 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.634e-6■■■■□ 22.8
RPS3P23396 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.68■□□□□ 0.583e-6■■■■□ 22.8
RPS3P23396 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.534e-6■■■■□ 22.8
RPS3P23396 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.28■□□□□ 0.524e-6■■■■□ 22.8
RPS3P23396 EDC3-208ENST00000565602 1862 ntTSL 518.22■□□□□ 0.514e-6■■■■□ 22.8
Retrieved 100 of 24,271 protein–RNA pairs in 221.9 ms