Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.52■■□□□ 1.52
COL11A2P13942 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.52■■□□□ 1.52
COL11A2P13942 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.52■■□□□ 1.52
COL11A2P13942 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.52■■□□□ 1.52
COL11A2P13942 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
COL11A2P13942 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL11A2P13942 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
COL11A2P13942 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
COL11A2P13942 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.52■■□□□ 1.52
COL11A2P13942 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 AC116351.2-201ENST00000606540 1585 ntBASIC24.51■■□□□ 1.51
COL11A2P13942 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
COL11A2P13942 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
COL11A2P13942 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.51■■□□□ 1.51
COL11A2P13942 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
COL11A2P13942 ANKRD20A18P-201ENST00000359341 492 ntBASIC24.5■■□□□ 1.51
COL11A2P13942 KRT8P17-201ENST00000453110 1448 ntBASIC24.5■■□□□ 1.51
COL11A2P13942 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL11A2P13942 LINC01238-205ENST00000567549 1107 ntBASIC24.5■■□□□ 1.51
COL11A2P13942 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
COL11A2P13942 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
COL11A2P13942 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.5■■□□□ 1.51
COL11A2P13942 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.5■■□□□ 1.51
COL11A2P13942 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.5■■□□□ 1.51
COL11A2P13942 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL11A2P13942 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.5■■□□□ 1.51
COL11A2P13942 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
COL11A2P13942 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.49■■□□□ 1.51
COL11A2P13942 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL11A2P13942 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.49■■□□□ 1.51
COL11A2P13942 AC091390.4-202ENST00000476426 537 ntBASIC24.49■■□□□ 1.51
COL11A2P13942 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL11A2P13942 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.49■■□□□ 1.51
COL11A2P13942 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.49■■□□□ 1.51
COL11A2P13942 AL138966.2-201ENST00000621997 464 ntBASIC24.49■■□□□ 1.51
COL11A2P13942 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
COL11A2P13942 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL11A2P13942 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.49■■□□□ 1.51
COL11A2P13942 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC24.49■■□□□ 1.51
COL11A2P13942 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
COL11A2P13942 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.49■■□□□ 1.51
COL11A2P13942 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
COL11A2P13942 MFAP1P1-201ENST00000442257 1255 ntBASIC24.49■■□□□ 1.51
COL11A2P13942 AL359075.1-203ENST00000462729 1002 ntBASIC24.49■■□□□ 1.51
COL11A2P13942 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.49■■□□□ 1.51
COL11A2P13942 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC24.49■■□□□ 1.51
COL11A2P13942 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
COL11A2P13942 AP000550.4-202ENST00000639755 178 ntBASIC24.49■■□□□ 1.51
COL11A2P13942 AL049796.1-201ENST00000565336 1766 ntBASIC24.49■■□□□ 1.51
COL11A2P13942 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
COL11A2P13942 AC009947.2-201ENST00000444014 672 ntBASIC24.48■■□□□ 1.51
COL11A2P13942 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
COL11A2P13942 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.48■■□□□ 1.51
COL11A2P13942 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.48■■□□□ 1.51
COL11A2P13942 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
COL11A2P13942 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.48■■□□□ 1.51
COL11A2P13942 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.47■■□□□ 1.51
COL11A2P13942 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC24.47■■□□□ 1.51
COL11A2P13942 AC091076.1-201ENST00000610741 619 ntBASIC24.47■■□□□ 1.51
COL11A2P13942 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 GOLGA6L3-201ENST00000507199 1679 ntBASIC24.47■■□□□ 1.51
COL11A2P13942 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.47■■□□□ 1.51
COL11A2P13942 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC24.47■■□□□ 1.51
COL11A2P13942 TFP1-202ENST00000475455 1573 ntBASIC24.47■■□□□ 1.51
COL11A2P13942 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL11A2P13942 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.47■■□□□ 1.51
COL11A2P13942 SLC25A1P4-201ENST00000567977 778 ntBASIC24.47■■□□□ 1.51
COL11A2P13942 AC083849.1-201ENST00000615227 514 ntBASIC24.47■■□□□ 1.51
COL11A2P13942 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.47■■□□□ 1.51
COL11A2P13942 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.46■■□□□ 1.51
COL11A2P13942 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms