Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH1P12830 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH1P12830 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CDH1P12830 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH1P12830 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH1P12830 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH1P12830 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.37■□□□□ 0.69
CDH1P12830 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH1P12830 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CDH1P12830 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDH1P12830 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH1P12830 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDH1P12830 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.37■□□□□ 0.69
CDH1P12830 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDH1P12830 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CDH1P12830 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH1P12830 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH1P12830 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH1P12830 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDH1P12830 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CDH1P12830 AC069152.1-201ENST00000438030 544 ntBASIC19.36■□□□□ 0.69
CDH1P12830 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.36■□□□□ 0.69
CDH1P12830 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH1P12830 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDH1P12830 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.36■□□□□ 0.69
CDH1P12830 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 MYC-209ENST00000641252 345 ntBASIC19.36■□□□□ 0.69
CDH1P12830 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
CDH1P12830 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDH1P12830 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH1P12830 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH1P12830 AC097658.1-201ENST00000475555 843 ntBASIC19.35■□□□□ 0.69
CDH1P12830 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.35■□□□□ 0.69
CDH1P12830 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.35■□□□□ 0.69
CDH1P12830 AC133041.1-202ENST00000642053 222 ntBASIC19.35■□□□□ 0.69
CDH1P12830 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.35■□□□□ 0.69
CDH1P12830 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDH1P12830 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDH1P12830 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CDH1P12830 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH1P12830 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDH1P12830 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH1P12830 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CDH1P12830 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CDH1P12830 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.34■□□□□ 0.69
CDH1P12830 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDH1P12830 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH1P12830 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH1P12830 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDH1P12830 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.34■□□□□ 0.69
CDH1P12830 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH1P12830 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH1P12830 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDH1P12830 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CDH1P12830 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDH1P12830 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.33■□□□□ 0.69
CDH1P12830 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.33■□□□□ 0.69
CDH1P12830 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH1P12830 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDH1P12830 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.33■□□□□ 0.69
CDH1P12830 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH1P12830 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH1P12830 AC073210.2-201ENST00000430369 194 ntBASIC19.33■□□□□ 0.68
CDH1P12830 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.33■□□□□ 0.68
CDH1P12830 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CDH1P12830 AC083880.1-201ENST00000608266 535 ntBASIC19.33■□□□□ 0.68
CDH1P12830 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.33■□□□□ 0.68
CDH1P12830 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH1P12830 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH1P12830 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH1P12830 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH1P12830 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH1P12830 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.33■□□□□ 0.68
CDH1P12830 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDH1P12830 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDH1P12830 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms