Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.96■□□□□ 0.95
KRT3P12035 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.96■□□□□ 0.95
KRT3P12035 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.96■□□□□ 0.95
KRT3P12035 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KRT3P12035 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT3P12035 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KRT3P12035 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
KRT3P12035 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT3P12035 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT3P12035 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT3P12035 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT3P12035 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT3P12035 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT3P12035 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT3P12035 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT3P12035 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT3P12035 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KRT3P12035 AL138781.1-201ENST00000566567 1274 ntBASIC20.95■□□□□ 0.94
KRT3P12035 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT3P12035 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT3P12035 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT3P12035 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT3P12035 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KRT3P12035 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.95■□□□□ 0.94
KRT3P12035 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.95■□□□□ 0.94
KRT3P12035 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KRT3P12035 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.94■□□□□ 0.94
KRT3P12035 TMEM179-206ENST00000616017 1645 ntBASIC20.94■□□□□ 0.94
KRT3P12035 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
KRT3P12035 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
KRT3P12035 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
KRT3P12035 AC104771.1-201ENST00000603335 964 ntBASIC20.94■□□□□ 0.94
KRT3P12035 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.94■□□□□ 0.94
KRT3P12035 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KRT3P12035 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT3P12035 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.93■□□□□ 0.94
KRT3P12035 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT3P12035 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT3P12035 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT3P12035 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT3P12035 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
KRT3P12035 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT3P12035 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
KRT3P12035 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT3P12035 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KRT3P12035 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT3P12035 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.93■□□□□ 0.94
KRT3P12035 AC097658.1-201ENST00000475555 843 ntBASIC20.93■□□□□ 0.94
KRT3P12035 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT3P12035 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.93■□□□□ 0.94
KRT3P12035 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT3P12035 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.93■□□□□ 0.94
KRT3P12035 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
KRT3P12035 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.93■□□□□ 0.94
KRT3P12035 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KRT3P12035 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT3P12035 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT3P12035 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT3P12035 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
KRT3P12035 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
KRT3P12035 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.92■□□□□ 0.94
KRT3P12035 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.92■□□□□ 0.94
KRT3P12035 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.92■□□□□ 0.94
KRT3P12035 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.92■□□□□ 0.94
KRT3P12035 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
KRT3P12035 MYC-209ENST00000641252 345 ntBASIC20.92■□□□□ 0.94
KRT3P12035 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KRT3P12035 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
KRT3P12035 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT3P12035 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT3P12035 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT3P12035 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT3P12035 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT3P12035 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KRT3P12035 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
KRT3P12035 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT3P12035 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms