Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGB1P09429 AL138781.1-201ENST00000566567 1274 ntBASIC23.49■■□□□ 1.35
HMGB1P09429 AC142086.2-201ENST00000569753 217 ntBASIC23.49■■□□□ 1.35
HMGB1P09429 AC104771.1-201ENST00000603335 964 ntBASIC23.49■■□□□ 1.35
HMGB1P09429 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
HMGB1P09429 HLA-B-256ENST00000639848 1089 ntBASIC23.49■■□□□ 1.35
HMGB1P09429 AC133041.1-202ENST00000642053 222 ntBASIC23.49■■□□□ 1.35
HMGB1P09429 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGB1P09429 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.49■■□□□ 1.35
HMGB1P09429 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGB1P09429 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
HMGB1P09429 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.49■■□□□ 1.35
HMGB1P09429 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HMGB1P09429 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.48■■□□□ 1.35
HMGB1P09429 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGB1P09429 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGB1P09429 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.48■■□□□ 1.35
HMGB1P09429 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGB1P09429 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGB1P09429 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGB1P09429 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.48■■□□□ 1.35
HMGB1P09429 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGB1P09429 AC125437.2-201ENST00000625180 2167 ntBASIC23.48■■□□□ 1.35
HMGB1P09429 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
HMGB1P09429 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGB1P09429 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGB1P09429 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HMGB1P09429 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.47■■□□□ 1.35
HMGB1P09429 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HMGB1P09429 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC23.47■■□□□ 1.35
HMGB1P09429 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
HMGB1P09429 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HMGB1P09429 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.47■■□□□ 1.35
HMGB1P09429 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
HMGB1P09429 AC069152.1-201ENST00000438030 544 ntBASIC23.47■■□□□ 1.35
HMGB1P09429 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.47■■□□□ 1.35
HMGB1P09429 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HMGB1P09429 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HMGB1P09429 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.47■■□□□ 1.35
HMGB1P09429 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.47■■□□□ 1.35
HMGB1P09429 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.47■■□□□ 1.35
HMGB1P09429 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
HMGB1P09429 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HMGB1P09429 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
HMGB1P09429 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.47■■□□□ 1.35
HMGB1P09429 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
HMGB1P09429 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HMGB1P09429 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HMGB1P09429 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HMGB1P09429 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.46■■□□□ 1.35
HMGB1P09429 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HMGB1P09429 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
HMGB1P09429 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC23.46■■□□□ 1.35
HMGB1P09429 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.46■■□□□ 1.35
HMGB1P09429 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.46■■□□□ 1.35
HMGB1P09429 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.46■■□□□ 1.35
HMGB1P09429 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.46■■□□□ 1.35
HMGB1P09429 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
HMGB1P09429 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.45■■□□□ 1.35
HMGB1P09429 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HMGB1P09429 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.45■■□□□ 1.35
HMGB1P09429 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.45■■□□□ 1.35
HMGB1P09429 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
HMGB1P09429 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
HMGB1P09429 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
HMGB1P09429 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.45■■□□□ 1.34
HMGB1P09429 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
HMGB1P09429 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
HMGB1P09429 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.34
HMGB1P09429 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.45■■□□□ 1.34
HMGB1P09429 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.45■■□□□ 1.34
HMGB1P09429 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.45■■□□□ 1.34
HMGB1P09429 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.45■■□□□ 1.34
HMGB1P09429 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.45■■□□□ 1.34
HMGB1P09429 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.45■■□□□ 1.34
HMGB1P09429 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
HMGB1P09429 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.45■■□□□ 1.34
HMGB1P09429 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.45■■□□□ 1.34
HMGB1P09429 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.45■■□□□ 1.34
HMGB1P09429 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HMGB1P09429 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
HMGB1P09429 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HMGB1P09429 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
HMGB1P09429 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
HMGB1P09429 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.44■■□□□ 1.34
HMGB1P09429 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HMGB1P09429 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HMGB1P09429 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
HMGB1P09429 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HMGB1P09429 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC23.44■■□□□ 1.34
HMGB1P09429 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms