Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.9■□□□□ 0.62
CTSBP07858 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSBP07858 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSBP07858 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.9■□□□□ 0.62
CTSBP07858 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSBP07858 GABARAPL3-202ENST00000624044 1851 ntBASIC18.9■□□□□ 0.62
CTSBP07858 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CTSBP07858 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.9■□□□□ 0.62
CTSBP07858 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.9■□□□□ 0.62
CTSBP07858 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSBP07858 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CTSBP07858 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CTSBP07858 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.89■□□□□ 0.62
CTSBP07858 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.89■□□□□ 0.62
CTSBP07858 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTSBP07858 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.89■□□□□ 0.62
CTSBP07858 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CTSBP07858 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTSBP07858 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSBP07858 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CTSBP07858 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.89■□□□□ 0.61
CTSBP07858 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.89■□□□□ 0.61
CTSBP07858 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.89■□□□□ 0.61
CTSBP07858 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTSBP07858 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CTSBP07858 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.89■□□□□ 0.61
CTSBP07858 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSBP07858 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.89■□□□□ 0.61
CTSBP07858 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSBP07858 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSBP07858 NBPF21P-201ENST00000425093 1451 ntBASIC18.89■□□□□ 0.61
CTSBP07858 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CTSBP07858 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSBP07858 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CTSBP07858 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.88■□□□□ 0.61
CTSBP07858 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSBP07858 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSBP07858 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSBP07858 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CTSBP07858 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSBP07858 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSBP07858 AC112907.3-201ENST00000577781 2400 ntBASIC18.88■□□□□ 0.61
CTSBP07858 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.88■□□□□ 0.61
CTSBP07858 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CTSBP07858 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CTSBP07858 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.88■□□□□ 0.61
CTSBP07858 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTSBP07858 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.87■□□□□ 0.61
CTSBP07858 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSBP07858 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSBP07858 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTSBP07858 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSBP07858 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSBP07858 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSBP07858 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.87■□□□□ 0.61
CTSBP07858 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.87■□□□□ 0.61
CTSBP07858 KRT16P6-202ENST00000425692 1426 ntBASIC18.87■□□□□ 0.61
CTSBP07858 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.87■□□□□ 0.61
CTSBP07858 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
CTSBP07858 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.87■□□□□ 0.61
CTSBP07858 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.87■□□□□ 0.61
CTSBP07858 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.87■□□□□ 0.61
CTSBP07858 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.87■□□□□ 0.61
CTSBP07858 AC018553.1-201ENST00000616682 1458 ntBASIC18.87■□□□□ 0.61
CTSBP07858 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTSBP07858 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CTSBP07858 AL691432.2-201ENST00000607222 2038 ntBASIC18.86■□□□□ 0.61
CTSBP07858 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CTSBP07858 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.86■□□□□ 0.61
CTSBP07858 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CTSBP07858 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTSBP07858 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTSBP07858 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.86■□□□□ 0.61
CTSBP07858 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms