Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.5■□□□□ 0.23
CTSDP07339 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CTSDP07339 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.5■□□□□ 0.23
CTSDP07339 AC105265.2-201ENST00000467189 838 ntBASIC16.5■□□□□ 0.23
CTSDP07339 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.5■□□□□ 0.23
CTSDP07339 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.5■□□□□ 0.23
CTSDP07339 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CTSDP07339 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTSDP07339 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.49■□□□□ 0.23
CTSDP07339 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CTSDP07339 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.49■□□□□ 0.23
CTSDP07339 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.49■□□□□ 0.23
CTSDP07339 PGM5P4-201ENST00000421970 445 ntBASIC16.49■□□□□ 0.23
CTSDP07339 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.49■□□□□ 0.23
CTSDP07339 CCDC92B-201ENST00000575506 885 ntBASIC16.49■□□□□ 0.23
CTSDP07339 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.49■□□□□ 0.23
CTSDP07339 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.49■□□□□ 0.23
CTSDP07339 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CTSDP07339 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CTSDP07339 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSDP07339 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CTSDP07339 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CTSDP07339 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSDP07339 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSDP07339 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CTSDP07339 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
CTSDP07339 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSDP07339 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 AL138781.2-201ENST00000617896 1843 ntBASIC16.48■□□□□ 0.23
CTSDP07339 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSDP07339 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CTSDP07339 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CTSDP07339 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.48■□□□□ 0.23
CTSDP07339 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSDP07339 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CTSDP07339 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 RBM17P2-201ENST00000616397 1405 ntBASIC16.47■□□□□ 0.23
CTSDP07339 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 IRS3P-201ENST00000223076 1006 ntBASIC16.47■□□□□ 0.23
CTSDP07339 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 MIR939-201ENST00000401314 82 ntBASIC16.47■□□□□ 0.23
CTSDP07339 AC091305.1-201ENST00000479476 895 ntBASIC16.47■□□□□ 0.23
CTSDP07339 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.47■□□□□ 0.23
CTSDP07339 KRT18P20-201ENST00000548986 1279 ntBASIC16.47■□□□□ 0.23
CTSDP07339 AF213884.3-201ENST00000563833 479 ntBASIC16.47■□□□□ 0.23
CTSDP07339 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.47■□□□□ 0.23
CTSDP07339 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSDP07339 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSDP07339 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CTSDP07339 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CTSDP07339 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSDP07339 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CTSDP07339 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CTSDP07339 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms