Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TPM3P06753 AC096631.2-201ENST00000436136 790 ntBASIC22.26■■□□□ 1.15
TPM3P06753 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPM3P06753 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TPM3P06753 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPM3P06753 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.26■■□□□ 1.15
TPM3P06753 AC079598.2-202ENST00000546624 1451 ntBASIC22.26■■□□□ 1.15
TPM3P06753 AC090340.1-201ENST00000620778 4980 ntBASIC22.26■■□□□ 1.15
TPM3P06753 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPM3P06753 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
TPM3P06753 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPM3P06753 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPM3P06753 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TPM3P06753 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.25■■□□□ 1.15
TPM3P06753 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TPM3P06753 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TPM3P06753 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TPM3P06753 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TPM3P06753 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.25■■□□□ 1.15
TPM3P06753 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TPM3P06753 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TPM3P06753 MIR939-201ENST00000401314 82 ntBASIC22.25■■□□□ 1.15
TPM3P06753 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.25■■□□□ 1.15
TPM3P06753 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.25■■□□□ 1.15
TPM3P06753 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.25■■□□□ 1.15
TPM3P06753 AL358852.1-201ENST00000623174 1268 ntBASIC22.25■■□□□ 1.15
TPM3P06753 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.25■■□□□ 1.15
TPM3P06753 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TPM3P06753 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TPM3P06753 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TPM3P06753 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TPM3P06753 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TPM3P06753 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TPM3P06753 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
TPM3P06753 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TPM3P06753 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TPM3P06753 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.24■■□□□ 1.15
TPM3P06753 DPP3P2-201ENST00000416030 1696 ntBASIC22.24■■□□□ 1.15
TPM3P06753 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TPM3P06753 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.24■■□□□ 1.15
TPM3P06753 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.24■■□□□ 1.15
TPM3P06753 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.24■■□□□ 1.15
TPM3P06753 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.24■■□□□ 1.15
TPM3P06753 AF213884.3-201ENST00000563833 479 ntBASIC22.24■■□□□ 1.15
TPM3P06753 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.24■■□□□ 1.15
TPM3P06753 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.24■■□□□ 1.15
TPM3P06753 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.24■■□□□ 1.15
TPM3P06753 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TPM3P06753 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC22.24■■□□□ 1.15
TPM3P06753 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TPM3P06753 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
TPM3P06753 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TPM3P06753 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.23■■□□□ 1.15
TPM3P06753 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.23■■□□□ 1.15
TPM3P06753 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
TPM3P06753 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 AC010141.2-201ENST00000452426 721 ntBASIC22.23■■□□□ 1.15
TPM3P06753 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TPM3P06753 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.23■■□□□ 1.15
TPM3P06753 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TPM3P06753 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
TPM3P06753 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
TPM3P06753 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TPM3P06753 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TPM3P06753 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TPM3P06753 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
TPM3P06753 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
TPM3P06753 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.22■■□□□ 1.15
TPM3P06753 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.22■■□□□ 1.15
TPM3P06753 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
TPM3P06753 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.22■■□□□ 1.15
TPM3P06753 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.22■■□□□ 1.15
TPM3P06753 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TPM3P06753 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TPM3P06753 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TPM3P06753 KRT8P36-201ENST00000489121 1440 ntBASIC22.22■■□□□ 1.15
TPM3P06753 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TPM3P06753 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
TPM3P06753 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TPM3P06753 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.21■■□□□ 1.15
TPM3P06753 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.21■■□□□ 1.15
TPM3P06753 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TPM3P06753 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms