Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
C4BPAP04003 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.41■■□□□ 1.02
C4BPAP04003 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
C4BPAP04003 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
C4BPAP04003 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
C4BPAP04003 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.4■■□□□ 1.02
C4BPAP04003 AC116351.2-201ENST00000606540 1585 ntBASIC21.4■■□□□ 1.02
C4BPAP04003 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C4BPAP04003 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
C4BPAP04003 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.4■■□□□ 1.02
C4BPAP04003 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C4BPAP04003 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C4BPAP04003 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
C4BPAP04003 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.4■■□□□ 1.02
C4BPAP04003 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C4BPAP04003 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
C4BPAP04003 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.4■■□□□ 1.02
C4BPAP04003 ESRRAP1-201ENST00000400596 1257 ntBASIC21.4■■□□□ 1.02
C4BPAP04003 POM121L13P-201ENST00000422362 380 ntBASIC21.4■■□□□ 1.02
C4BPAP04003 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C4BPAP04003 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.4■■□□□ 1.02
C4BPAP04003 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
C4BPAP04003 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
C4BPAP04003 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.4■■□□□ 1.02
C4BPAP04003 AC009237.14-201ENST00000609975 1594 ntBASIC21.4■■□□□ 1.02
C4BPAP04003 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
C4BPAP04003 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.39■■□□□ 1.02
C4BPAP04003 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
C4BPAP04003 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
C4BPAP04003 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
C4BPAP04003 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
C4BPAP04003 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.39■■□□□ 1.01
C4BPAP04003 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
C4BPAP04003 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.39■■□□□ 1.01
C4BPAP04003 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.39■■□□□ 1.01
C4BPAP04003 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
C4BPAP04003 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.39■■□□□ 1.01
C4BPAP04003 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
C4BPAP04003 TMEM179-206ENST00000616017 1645 ntBASIC21.39■■□□□ 1.01
C4BPAP04003 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
C4BPAP04003 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
C4BPAP04003 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
C4BPAP04003 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.39■■□□□ 1.01
C4BPAP04003 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
C4BPAP04003 AC018553.1-201ENST00000616682 1458 ntBASIC21.39■■□□□ 1.01
C4BPAP04003 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
C4BPAP04003 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.38■■□□□ 1.01
C4BPAP04003 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
C4BPAP04003 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C4BPAP04003 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C4BPAP04003 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
C4BPAP04003 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
C4BPAP04003 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
C4BPAP04003 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.38■■□□□ 1.01
C4BPAP04003 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C4BPAP04003 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.38■■□□□ 1.01
C4BPAP04003 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.38■■□□□ 1.01
C4BPAP04003 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
C4BPAP04003 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
C4BPAP04003 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C4BPAP04003 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C4BPAP04003 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.37■■□□□ 1.01
C4BPAP04003 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.37■■□□□ 1.01
C4BPAP04003 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C4BPAP04003 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
C4BPAP04003 TFP1-202ENST00000475455 1573 ntBASIC21.37■■□□□ 1.01
C4BPAP04003 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.37■■□□□ 1.01
C4BPAP04003 AP001271.2-201ENST00000624018 1556 ntBASIC21.37■■□□□ 1.01
C4BPAP04003 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.37■■□□□ 1.01
C4BPAP04003 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
C4BPAP04003 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
C4BPAP04003 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C4BPAP04003 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.37■■□□□ 1.01
C4BPAP04003 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.37■■□□□ 1.01
C4BPAP04003 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.37■■□□□ 1.01
C4BPAP04003 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.37■■□□□ 1.01
C4BPAP04003 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.37■■□□□ 1.01
C4BPAP04003 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C4BPAP04003 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
C4BPAP04003 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
C4BPAP04003 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.37■■□□□ 1.01
C4BPAP04003 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.36■■□□□ 1.01
C4BPAP04003 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.36■■□□□ 1.01
C4BPAP04003 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C4BPAP04003 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.36■■□□□ 1.01
C4BPAP04003 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
C4BPAP04003 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.36■■□□□ 1.01
C4BPAP04003 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C4BPAP04003 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C4BPAP04003 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.36■■□□□ 1.01
C4BPAP04003 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C4BPAP04003 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C4BPAP04003 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C4BPAP04003 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.36■■□□□ 1.01
C4BPAP04003 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.36■■□□□ 1.01
C4BPAP04003 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.36■■□□□ 1.01
C4BPAP04003 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.36■■□□□ 1.01
C4BPAP04003 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.36■■□□□ 1.01
C4BPAP04003 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C4BPAP04003 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms