Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN9O95484 MKRN4P-201ENST00000444706 1521 ntBASIC19.25■□□□□ 0.67
CLDN9O95484 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN9O95484 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN9O95484 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN9O95484 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN9O95484 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLDN9O95484 AL158211.5-201ENST00000623583 2518 ntBASIC19.24■□□□□ 0.67
CLDN9O95484 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN9O95484 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN9O95484 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN9O95484 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN9O95484 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN9O95484 AL050303.2-201ENST00000619798 666 ntBASIC19.24■□□□□ 0.67
CLDN9O95484 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN9O95484 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CLDN9O95484 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN9O95484 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN9O95484 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN9O95484 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CLDN9O95484 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN9O95484 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLDN9O95484 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
CLDN9O95484 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN9O95484 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN9O95484 MIR663A-201ENST00000385250 93 ntBASIC19.23■□□□□ 0.67
CLDN9O95484 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN9O95484 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN9O95484 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN9O95484 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN9O95484 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN9O95484 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN9O95484 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN9O95484 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN9O95484 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CLDN9O95484 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLDN9O95484 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.22■□□□□ 0.67
CLDN9O95484 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
CLDN9O95484 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN9O95484 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CLDN9O95484 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN9O95484 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CLDN9O95484 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.22■□□□□ 0.67
CLDN9O95484 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN9O95484 RAP2CP1-201ENST00000605103 478 ntBASIC19.22■□□□□ 0.67
CLDN9O95484 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN9O95484 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN9O95484 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN9O95484 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN9O95484 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN9O95484 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CLDN9O95484 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDN9O95484 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN9O95484 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN9O95484 BX276092.2-201ENST00000417668 665 ntBASIC19.21■□□□□ 0.67
CLDN9O95484 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN9O95484 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.21■□□□□ 0.67
CLDN9O95484 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CLDN9O95484 AP001271.2-201ENST00000624018 1556 ntBASIC19.21■□□□□ 0.67
CLDN9O95484 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN9O95484 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.21■□□□□ 0.67
CLDN9O95484 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN9O95484 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN9O95484 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.21■□□□□ 0.67
CLDN9O95484 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.21■□□□□ 0.67
CLDN9O95484 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDN9O95484 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN9O95484 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN9O95484 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN9O95484 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN9O95484 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN9O95484 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN9O95484 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN9O95484 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CLDN9O95484 CROCCP5-201ENST00000436658 830 ntBASIC19.2■□□□□ 0.66
CLDN9O95484 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN9O95484 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN9O95484 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CLDN9O95484 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms