Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 AC007322.1-201ENST00000426983 750 ntBASIC20.11■□□□□ 0.81
USP1O94782 AC008694.1-202ENST00000636953 945 ntBASIC20.11■□□□□ 0.81
USP1O94782 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
USP1O94782 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP1O94782 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
USP1O94782 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP1O94782 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.1■□□□□ 0.81
USP1O94782 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP1O94782 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP1O94782 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP1O94782 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP1O94782 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.1■□□□□ 0.81
USP1O94782 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.1■□□□□ 0.81
USP1O94782 AL031963.3-201ENST00000606441 850 ntBASIC20.1■□□□□ 0.81
USP1O94782 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.1■□□□□ 0.81
USP1O94782 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.1■□□□□ 0.81
USP1O94782 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.1■□□□□ 0.81
USP1O94782 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
USP1O94782 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.1■□□□□ 0.81
USP1O94782 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP1O94782 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.1■□□□□ 0.81
USP1O94782 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP1O94782 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP1O94782 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP1O94782 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
USP1O94782 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.09■□□□□ 0.81
USP1O94782 AL158211.5-201ENST00000623583 2518 ntBASIC20.09■□□□□ 0.81
USP1O94782 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.09■□□□□ 0.81
USP1O94782 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.09■□□□□ 0.81
USP1O94782 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 OR10C1-204ENST00000622521 1039 ntBASIC20.09■□□□□ 0.81
USP1O94782 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP1O94782 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
USP1O94782 KRT8P20-201ENST00000423953 1409 ntBASIC20.09■□□□□ 0.81
USP1O94782 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP1O94782 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.08■□□□□ 0.81
USP1O94782 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.08■□□□□ 0.81
USP1O94782 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.08■□□□□ 0.81
USP1O94782 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP1O94782 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP1O94782 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
USP1O94782 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
USP1O94782 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.08■□□□□ 0.81
USP1O94782 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
USP1O94782 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.08■□□□□ 0.81
USP1O94782 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.08■□□□□ 0.81
USP1O94782 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
USP1O94782 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.08■□□□□ 0.81
USP1O94782 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP1O94782 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP1O94782 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP1O94782 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.08■□□□□ 0.8
USP1O94782 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP1O94782 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
USP1O94782 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
USP1O94782 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.07■□□□□ 0.8
USP1O94782 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
USP1O94782 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 AL355472.2-201ENST00000422958 438 ntBASIC20.07■□□□□ 0.8
USP1O94782 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.07■□□□□ 0.8
USP1O94782 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.07■□□□□ 0.8
USP1O94782 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.07■□□□□ 0.8
USP1O94782 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.07■□□□□ 0.8
USP1O94782 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.07■□□□□ 0.8
USP1O94782 KRT16P6-202ENST00000425692 1426 ntBASIC20.07■□□□□ 0.8
USP1O94782 AC010980.2-201ENST00000587099 1412 ntBASIC20.07■□□□□ 0.8
USP1O94782 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.07■□□□□ 0.8
USP1O94782 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
USP1O94782 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.07■□□□□ 0.8
USP1O94782 AC009237.14-201ENST00000609975 1594 ntBASIC20.07■□□□□ 0.8
USP1O94782 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.07■□□□□ 0.8
USP1O94782 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP1O94782 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP1O94782 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.06■□□□□ 0.8
USP1O94782 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
USP1O94782 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.06■□□□□ 0.8
USP1O94782 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms