Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 KRT87P-202ENST00000534226 1464 ntBASIC16.17■□□□□ 0.18
CLN5O75503 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLN5O75503 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CLN5O75503 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.17■□□□□ 0.18
CLN5O75503 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLN5O75503 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CLN5O75503 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CLN5O75503 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CLN5O75503 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLN5O75503 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CLN5O75503 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.16■□□□□ 0.18
CLN5O75503 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.16■□□□□ 0.18
CLN5O75503 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 AC106820.2-201ENST00000563775 3264 ntBASIC16.16■□□□□ 0.18
CLN5O75503 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLN5O75503 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.16■□□□□ 0.18
CLN5O75503 IRS3P-201ENST00000223076 1006 ntBASIC16.16■□□□□ 0.18
CLN5O75503 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CLN5O75503 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.16■□□□□ 0.18
CLN5O75503 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.16■□□□□ 0.18
CLN5O75503 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 MIR6084-201ENST00000622012 110 ntBASIC16.16■□□□□ 0.18
CLN5O75503 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLN5O75503 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLN5O75503 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLN5O75503 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLN5O75503 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.15■□□□□ 0.18
CLN5O75503 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLN5O75503 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.15■□□□□ 0.18
CLN5O75503 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLN5O75503 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.15■□□□□ 0.18
CLN5O75503 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.15■□□□□ 0.18
CLN5O75503 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
CLN5O75503 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLN5O75503 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CLN5O75503 AC011484.1-201ENST00000377652 1995 ntBASIC16.15■□□□□ 0.18
CLN5O75503 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLN5O75503 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLN5O75503 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.14■□□□□ 0.17
CLN5O75503 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.14■□□□□ 0.17
CLN5O75503 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLN5O75503 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLN5O75503 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLN5O75503 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.14■□□□□ 0.17
CLN5O75503 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.14■□□□□ 0.17
CLN5O75503 AL162377.1-201ENST00000618844 1793 ntBASIC16.14■□□□□ 0.17
CLN5O75503 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLN5O75503 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.14■□□□□ 0.17
CLN5O75503 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.14■□□□□ 0.17
CLN5O75503 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLN5O75503 AC005837.3-201ENST00000612163 286 ntBASIC16.14■□□□□ 0.17
CLN5O75503 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.14■□□□□ 0.17
CLN5O75503 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLN5O75503 AL133373.2-201ENST00000623187 2828 ntBASIC16.14■□□□□ 0.17
CLN5O75503 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CLN5O75503 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLN5O75503 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms