Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 IL11-204ENST00000590625 1028 ntTSL 2 BASIC8.94□□□□□ -0.98
USH2AO75445 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
USH2AO75445 AC020928.2-201ENST00000588717 2197 ntBASIC8.93□□□□□ -0.98
USH2AO75445 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 RPP21-221ENST00000428040 594 ntTSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 AC023632.3-201ENST00000521633 145 ntBASIC8.93□□□□□ -0.98
USH2AO75445 GCSHP2-201ENST00000560971 527 ntBASIC8.93□□□□□ -0.98
USH2AO75445 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 KRT18P1-202ENST00000452408 1331 ntBASIC8.93□□□□□ -0.98
USH2AO75445 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
USH2AO75445 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC8.93□□□□□ -0.98
USH2AO75445 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 AC096733.2-201ENST00000609937 1394 ntBASIC8.93□□□□□ -0.98
USH2AO75445 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC8.93□□□□□ -0.98
USH2AO75445 PMS2P2-201ENST00000425039 1128 ntBASIC8.93□□□□□ -0.98
USH2AO75445 RNA5SP419-201ENST00000515908 135 ntBASIC8.93□□□□□ -0.98
USH2AO75445 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 AC010653.2-201ENST00000623505 997 ntBASIC8.93□□□□□ -0.98
USH2AO75445 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 GCA-201ENST00000233612 1694 ntTSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 TEX30-205ENST00000376029 959 ntTSL 2 BASIC8.93□□□□□ -0.98
USH2AO75445 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC8.93□□□□□ -0.98
USH2AO75445 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC8.93□□□□□ -0.98
USH2AO75445 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
USH2AO75445 COX10-202ENST00000429152 875 ntTSL 2 BASIC8.92□□□□□ -0.98
USH2AO75445 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC8.92□□□□□ -0.98
USH2AO75445 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC8.92□□□□□ -0.98
USH2AO75445 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC8.92□□□□□ -0.98
USH2AO75445 C1QL1P1-201ENST00000568105 661 ntBASIC8.92□□□□□ -0.98
USH2AO75445 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC8.92□□□□□ -0.98
USH2AO75445 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
USH2AO75445 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 YBX1P10-201ENST00000444752 975 ntBASIC8.92□□□□□ -0.98
USH2AO75445 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 AC106795.1-205ENST00000512851 1056 ntBASIC8.92□□□□□ -0.98
USH2AO75445 RCC2P6-201ENST00000526625 1557 ntBASIC8.92□□□□□ -0.98
USH2AO75445 PNN-205ENST00000556530 601 ntTSL 2 BASIC8.92□□□□□ -0.98
USH2AO75445 AL356652.1-201ENST00000615962 565 ntBASIC8.92□□□□□ -0.98
USH2AO75445 IL9RP2-201ENST00000423948 1312 ntBASIC8.92□□□□□ -0.98
USH2AO75445 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC8.92□□□□□ -0.98
USH2AO75445 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
USH2AO75445 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC8.92□□□□□ -0.98
USH2AO75445 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC8.92□□□□□ -0.98
USH2AO75445 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC8.92□□□□□ -0.98
USH2AO75445 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
USH2AO75445 AP000692.2-201ENST00000608391 879 ntBASIC8.92□□□□□ -0.98
USH2AO75445 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
USH2AO75445 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
USH2AO75445 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC8.91□□□□□ -0.98
USH2AO75445 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC8.91□□□□□ -0.98
USH2AO75445 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC8.91□□□□□ -0.98
USH2AO75445 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 AC140113.3-201ENST00000605663 199 ntBASIC8.91□□□□□ -0.98
USH2AO75445 AC141257.4-201ENST00000634557 245 ntBASIC8.91□□□□□ -0.98
USH2AO75445 AC136944.6-201ENST00000634818 245 ntBASIC8.91□□□□□ -0.98
USH2AO75445 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
USH2AO75445 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC8.91□□□□□ -0.98
USH2AO75445 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC8.91□□□□□ -0.98
USH2AO75445 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC8.91□□□□□ -0.98
USH2AO75445 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC8.91□□□□□ -0.98
USH2AO75445 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC8.91□□□□□ -0.98
USH2AO75445 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
USH2AO75445 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms