Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN3O60637 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.52■□□□□ 0.88
TSPAN3O60637 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TSPAN3O60637 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN3O60637 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.52■□□□□ 0.88
TSPAN3O60637 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TSPAN3O60637 AC110285.5-201ENST00000611501 352 ntBASIC20.52■□□□□ 0.88
TSPAN3O60637 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.52■□□□□ 0.88
TSPAN3O60637 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN3O60637 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TSPAN3O60637 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.52■□□□□ 0.88
TSPAN3O60637 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TSPAN3O60637 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.52■□□□□ 0.87
TSPAN3O60637 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TSPAN3O60637 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TSPAN3O60637 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TSPAN3O60637 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TSPAN3O60637 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TSPAN3O60637 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.51■□□□□ 0.87
TSPAN3O60637 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
TSPAN3O60637 AC133681.1-201ENST00000465482 601 ntBASIC20.51■□□□□ 0.87
TSPAN3O60637 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.51■□□□□ 0.87
TSPAN3O60637 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TSPAN3O60637 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.51■□□□□ 0.87
TSPAN3O60637 AL121906.2-201ENST00000621597 723 ntBASIC20.51■□□□□ 0.87
TSPAN3O60637 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.51■□□□□ 0.87
TSPAN3O60637 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TSPAN3O60637 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TSPAN3O60637 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
TSPAN3O60637 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.51■□□□□ 0.87
TSPAN3O60637 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN3O60637 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
TSPAN3O60637 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN3O60637 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TSPAN3O60637 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.5■□□□□ 0.87
TSPAN3O60637 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN3O60637 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.5■□□□□ 0.87
TSPAN3O60637 Z99916.2-201ENST00000604037 246 ntBASIC20.5■□□□□ 0.87
TSPAN3O60637 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN3O60637 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.5■□□□□ 0.87
TSPAN3O60637 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN3O60637 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN3O60637 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN3O60637 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN3O60637 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TSPAN3O60637 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TSPAN3O60637 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.5■□□□□ 0.87
TSPAN3O60637 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
TSPAN3O60637 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.49■□□□□ 0.87
TSPAN3O60637 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.49■□□□□ 0.87
TSPAN3O60637 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TSPAN3O60637 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.49■□□□□ 0.87
TSPAN3O60637 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.49■□□□□ 0.87
TSPAN3O60637 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 AL596275.1-201ENST00000423464 877 ntBASIC20.49■□□□□ 0.87
TSPAN3O60637 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.49■□□□□ 0.87
TSPAN3O60637 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.49■□□□□ 0.87
TSPAN3O60637 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.49■□□□□ 0.87
TSPAN3O60637 KRT16P6-202ENST00000425692 1426 ntBASIC20.49■□□□□ 0.87
TSPAN3O60637 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TSPAN3O60637 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TSPAN3O60637 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TSPAN3O60637 AC092667.1-201ENST00000434301 2586 ntBASIC20.48■□□□□ 0.87
TSPAN3O60637 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TSPAN3O60637 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TSPAN3O60637 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TSPAN3O60637 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TSPAN3O60637 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.48■□□□□ 0.87
TSPAN3O60637 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.48■□□□□ 0.87
TSPAN3O60637 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.48■□□□□ 0.87
TSPAN3O60637 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 NBPF21P-201ENST00000425093 1451 ntBASIC20.48■□□□□ 0.87
TSPAN3O60637 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TSPAN3O60637 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TSPAN3O60637 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
TSPAN3O60637 FEM1AP1-201ENST00000431297 1995 ntBASIC20.47■□□□□ 0.87
TSPAN3O60637 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TSPAN3O60637 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms