Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AC007225.1-201ENST00000566331 1836 ntBASIC20.13■□□□□ 0.81
NPC1O15118 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1O15118 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1O15118 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1O15118 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1O15118 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1O15118 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.12■□□□□ 0.81
NPC1O15118 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NPC1O15118 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
NPC1O15118 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NPC1O15118 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
NPC1O15118 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1O15118 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1O15118 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.12■□□□□ 0.81
NPC1O15118 FAM197Y1-201ENST00000421178 764 ntBASIC20.12■□□□□ 0.81
NPC1O15118 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.12■□□□□ 0.81
NPC1O15118 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1O15118 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.12■□□□□ 0.81
NPC1O15118 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
NPC1O15118 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1O15118 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1O15118 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1O15118 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NPC1O15118 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1O15118 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1O15118 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1O15118 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1O15118 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NPC1O15118 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.11■□□□□ 0.81
NPC1O15118 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1O15118 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1O15118 DPP3P2-201ENST00000416030 1696 ntBASIC20.11■□□□□ 0.81
NPC1O15118 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NPC1O15118 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1O15118 AC087499.1-201ENST00000418141 1075 ntBASIC20.11■□□□□ 0.81
NPC1O15118 NIFKP9-201ENST00000419265 221 ntBASIC20.11■□□□□ 0.81
NPC1O15118 FAM210CP-201ENST00000445714 574 ntBASIC20.11■□□□□ 0.81
NPC1O15118 NUDT16P1-203ENST00000513809 620 ntBASIC20.11■□□□□ 0.81
NPC1O15118 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1O15118 AC097493.4-201ENST00000641197 219 ntBASIC20.11■□□□□ 0.81
NPC1O15118 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1O15118 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1O15118 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1O15118 AP006587.1-201ENST00000534129 1502 ntBASIC20.11■□□□□ 0.81
NPC1O15118 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NPC1O15118 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NPC1O15118 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NPC1O15118 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.1■□□□□ 0.81
NPC1O15118 AC116351.2-201ENST00000606540 1585 ntBASIC20.1■□□□□ 0.81
NPC1O15118 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.1■□□□□ 0.81
NPC1O15118 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.1■□□□□ 0.81
NPC1O15118 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.1■□□□□ 0.81
NPC1O15118 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.1■□□□□ 0.81
NPC1O15118 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
NPC1O15118 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.1■□□□□ 0.81
NPC1O15118 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.1■□□□□ 0.81
NPC1O15118 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 AC092720.2-201ENST00000602388 1665 ntBASIC20.1■□□□□ 0.81
NPC1O15118 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPC1O15118 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.09■□□□□ 0.81
NPC1O15118 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.09■□□□□ 0.81
NPC1O15118 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NPC1O15118 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NPC1O15118 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPC1O15118 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1O15118 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NPC1O15118 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1O15118 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
NPC1O15118 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1O15118 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1O15118 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1O15118 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1O15118 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPC1O15118 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.08■□□□□ 0.81
NPC1O15118 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.08■□□□□ 0.81
NPC1O15118 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms