Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TRAFD1O14545 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAFD1O14545 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAFD1O14545 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAFD1O14545 CD99P1-205ENST00000527459 561 ntBASIC20.37■□□□□ 0.85
TRAFD1O14545 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.37■□□□□ 0.85
TRAFD1O14545 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TRAFD1O14545 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.37■□□□□ 0.85
TRAFD1O14545 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAFD1O14545 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.37■□□□□ 0.85
TRAFD1O14545 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TRAFD1O14545 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.36■□□□□ 0.85
TRAFD1O14545 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TRAFD1O14545 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TRAFD1O14545 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.36■□□□□ 0.85
TRAFD1O14545 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAFD1O14545 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.36■□□□□ 0.85
TRAFD1O14545 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.36■□□□□ 0.85
TRAFD1O14545 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TRAFD1O14545 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TRAFD1O14545 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAFD1O14545 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TRAFD1O14545 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAFD1O14545 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAFD1O14545 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAFD1O14545 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAFD1O14545 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.35■□□□□ 0.85
TRAFD1O14545 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.35■□□□□ 0.85
TRAFD1O14545 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAFD1O14545 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.35■□□□□ 0.85
TRAFD1O14545 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TRAFD1O14545 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAFD1O14545 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAFD1O14545 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAFD1O14545 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAFD1O14545 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRAFD1O14545 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.35■□□□□ 0.85
TRAFD1O14545 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAFD1O14545 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.34■□□□□ 0.85
TRAFD1O14545 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRAFD1O14545 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAFD1O14545 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TRAFD1O14545 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAFD1O14545 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAFD1O14545 RNA5SP413-201ENST00000516373 109 ntBASIC20.34■□□□□ 0.85
TRAFD1O14545 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TRAFD1O14545 AC060766.5-201ENST00000590539 871 ntBASIC20.34■□□□□ 0.85
TRAFD1O14545 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.34■□□□□ 0.85
TRAFD1O14545 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRAFD1O14545 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAFD1O14545 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRAFD1O14545 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.34■□□□□ 0.85
TRAFD1O14545 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TRAFD1O14545 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAFD1O14545 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAFD1O14545 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAFD1O14545 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAFD1O14545 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAFD1O14545 AC112907.3-201ENST00000577781 2400 ntBASIC20.33■□□□□ 0.85
TRAFD1O14545 AC092720.2-201ENST00000602388 1665 ntBASIC20.33■□□□□ 0.85
TRAFD1O14545 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAFD1O14545 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAFD1O14545 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.33■□□□□ 0.85
TRAFD1O14545 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
TRAFD1O14545 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.33■□□□□ 0.85
TRAFD1O14545 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRAFD1O14545 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms