Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 MYC-209ENST00000641252 345 ntBASIC15.29■□□□□ 0.04
NDUFA4O00483 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.29■□□□□ 0.04
NDUFA4O00483 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NDUFA4O00483 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NDUFA4O00483 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.28■□□□□ 0.04
NDUFA4O00483 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 AC069152.1-201ENST00000438030 544 ntBASIC15.28■□□□□ 0.04
NDUFA4O00483 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
NDUFA4O00483 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.28■□□□□ 0.04
NDUFA4O00483 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.28■□□□□ 0.04
NDUFA4O00483 AC142086.2-201ENST00000569753 217 ntBASIC15.28■□□□□ 0.04
NDUFA4O00483 AC005829.2-201ENST00000571422 1056 ntBASIC15.28■□□□□ 0.04
NDUFA4O00483 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.28■□□□□ 0.04
NDUFA4O00483 HLA-B-256ENST00000639848 1089 ntBASIC15.28■□□□□ 0.04
NDUFA4O00483 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.28■□□□□ 0.04
NDUFA4O00483 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.28■□□□□ 0.04
NDUFA4O00483 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
NDUFA4O00483 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
NDUFA4O00483 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC15.28■□□□□ 0.04
NDUFA4O00483 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.27■□□□□ 0.04
NDUFA4O00483 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
NDUFA4O00483 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.27■□□□□ 0.04
NDUFA4O00483 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NDUFA4O00483 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NDUFA4O00483 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.27■□□□□ 0.04
NDUFA4O00483 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.27■□□□□ 0.04
NDUFA4O00483 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NDUFA4O00483 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
NDUFA4O00483 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA4O00483 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.27■□□□□ 0.03
NDUFA4O00483 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA4O00483 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA4O00483 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA4O00483 AP001271.2-201ENST00000624018 1556 ntBASIC15.27■□□□□ 0.03
NDUFA4O00483 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA4O00483 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA4O00483 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA4O00483 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NDUFA4O00483 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.27■□□□□ 0.03
NDUFA4O00483 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.26■□□□□ 0.03
NDUFA4O00483 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NDUFA4O00483 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.26■□□□□ 0.03
NDUFA4O00483 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NDUFA4O00483 PHGDH-210ENST00000641115 1638 ntBASIC15.26■□□□□ 0.03
NDUFA4O00483 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.26■□□□□ 0.03
NDUFA4O00483 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.26■□□□□ 0.03
NDUFA4O00483 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.26■□□□□ 0.03
NDUFA4O00483 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NDUFA4O00483 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NDUFA4O00483 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.26■□□□□ 0.03
NDUFA4O00483 AC009237.14-201ENST00000609975 1594 ntBASIC15.26■□□□□ 0.03
NDUFA4O00483 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NDUFA4O00483 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NDUFA4O00483 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NDUFA4O00483 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.25■□□□□ 0.03
NDUFA4O00483 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NDUFA4O00483 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NDUFA4O00483 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms