Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLC33A1O00400 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC33A1O00400 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLC33A1O00400 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.97■□□□□ 0.31
SLC33A1O00400 AC120498.9-201ENST00000339021 3867 ntBASIC16.96■□□□□ 0.31
SLC33A1O00400 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
SLC33A1O00400 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC33A1O00400 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
SLC33A1O00400 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SLC33A1O00400 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SLC33A1O00400 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC33A1O00400 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC33A1O00400 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SLC33A1O00400 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC33A1O00400 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC33A1O00400 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC33A1O00400 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLC33A1O00400 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.96■□□□□ 0.31
SLC33A1O00400 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC33A1O00400 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.96■□□□□ 0.31
SLC33A1O00400 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.96■□□□□ 0.31
SLC33A1O00400 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC33A1O00400 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SLC33A1O00400 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLC33A1O00400 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC33A1O00400 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.96■□□□□ 0.31
SLC33A1O00400 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLC33A1O00400 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC33A1O00400 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SLC33A1O00400 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC33A1O00400 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC33A1O00400 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC33A1O00400 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC33A1O00400 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC33A1O00400 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SLC33A1O00400 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC33A1O00400 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SLC33A1O00400 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC33A1O00400 AC068338.2-201ENST00000563278 1430 ntBASIC16.95■□□□□ 0.3
SLC33A1O00400 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC33A1O00400 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SLC33A1O00400 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SLC33A1O00400 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 TCF3P1-201ENST00000423021 1937 ntBASIC16.94■□□□□ 0.3
SLC33A1O00400 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC33A1O00400 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SLC33A1O00400 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC33A1O00400 RARRES2P4-201ENST00000514074 484 ntBASIC16.94■□□□□ 0.3
SLC33A1O00400 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.94■□□□□ 0.3
SLC33A1O00400 BID-214ENST00000617586 542 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC33A1O00400 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC33A1O00400 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC33A1O00400 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLC33A1O00400 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC33A1O00400 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SLC33A1O00400 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC33A1O00400 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC33A1O00400 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC33A1O00400 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC33A1O00400 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC33A1O00400 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC33A1O00400 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC33A1O00400 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC33A1O00400 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC33A1O00400 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC33A1O00400 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC33A1O00400 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLC33A1O00400 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC33A1O00400 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC33A1O00400 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC33A1O00400 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms