Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 AC019069.1-201ENST00000610008 1333 ntBASIC18.38■□□□□ 0.53
TNFRSF11BO00300 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TNFRSF11BO00300 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 TERF1P2-201ENST00000583350 1212 ntBASIC18.37■□□□□ 0.53
TNFRSF11BO00300 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.37■□□□□ 0.53
TNFRSF11BO00300 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.36■□□□□ 0.53
TNFRSF11BO00300 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 AC087633.2-202ENST00000565166 1439 ntBASIC18.35■□□□□ 0.53
TNFRSF11BO00300 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.35■□□□□ 0.53
TNFRSF11BO00300 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
TNFRSF11BO00300 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TNFRSF11BO00300 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms