Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.88■□□□□ 0.61
PDLIM1O00151 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.88■□□□□ 0.61
PDLIM1O00151 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM1O00151 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM1O00151 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM1O00151 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
PDLIM1O00151 AC120498.9-201ENST00000339021 3867 ntBASIC18.88■□□□□ 0.61
PDLIM1O00151 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 AL691432.2-201ENST00000607222 2038 ntBASIC18.88■□□□□ 0.61
PDLIM1O00151 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM1O00151 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.88■□□□□ 0.61
PDLIM1O00151 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM1O00151 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM1O00151 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM1O00151 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM1O00151 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.87■□□□□ 0.61
PDLIM1O00151 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM1O00151 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM1O00151 AL162430.1-201ENST00000480705 870 ntBASIC18.87■□□□□ 0.61
PDLIM1O00151 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM1O00151 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM1O00151 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.87■□□□□ 0.61
PDLIM1O00151 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.87■□□□□ 0.61
PDLIM1O00151 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM1O00151 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PDLIM1O00151 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM1O00151 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.86■□□□□ 0.61
PDLIM1O00151 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.86■□□□□ 0.61
PDLIM1O00151 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.86■□□□□ 0.61
PDLIM1O00151 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDLIM1O00151 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PDLIM1O00151 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM1O00151 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PDLIM1O00151 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.86■□□□□ 0.61
PDLIM1O00151 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.86■□□□□ 0.61
PDLIM1O00151 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PDLIM1O00151 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PDLIM1O00151 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM1O00151 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM1O00151 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
PDLIM1O00151 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.86■□□□□ 0.61
PDLIM1O00151 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.86■□□□□ 0.61
PDLIM1O00151 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM1O00151 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM1O00151 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM1O00151 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM1O00151 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PDLIM1O00151 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDLIM1O00151 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.85■□□□□ 0.61
PDLIM1O00151 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.85■□□□□ 0.61
PDLIM1O00151 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.85■□□□□ 0.61
PDLIM1O00151 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDLIM1O00151 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.85■□□□□ 0.61
PDLIM1O00151 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.85■□□□□ 0.61
PDLIM1O00151 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PDLIM1O00151 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.85■□□□□ 0.61
PDLIM1O00151 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.85■□□□□ 0.61
PDLIM1O00151 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PDLIM1O00151 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PDLIM1O00151 PCDHB18P-201ENST00000524813 2368 ntBASIC18.85■□□□□ 0.61
PDLIM1O00151 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PDLIM1O00151 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM1O00151 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PDLIM1O00151 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.85■□□□□ 0.61
PDLIM1O00151 AC061975.6-201ENST00000579045 1553 ntBASIC18.85■□□□□ 0.61
PDLIM1O00151 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PDLIM1O00151 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.84■□□□□ 0.61
PDLIM1O00151 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.84■□□□□ 0.61
PDLIM1O00151 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM1O00151 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.84■□□□□ 0.61
PDLIM1O00151 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms