Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPIPA2E9PIF3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 AC092720.2-201ENST00000602388 1665 ntBASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 KRASP1-201ENST00000407852 552 ntBASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 AC124016.1-201ENST00000609552 612 ntBASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPIPA2E9PIF3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 MIR4497-201ENST00000583208 89 ntBASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 FEM1AP1-201ENST00000431297 1995 ntBASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPIPA2E9PIF3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 SNORA78-201ENST00000459373 127 ntBASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 PRKY-204ENST00000533551 1019 ntBASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NPIPA2E9PIF3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 AC110285.5-201ENST00000611501 352 ntBASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPIPA2E9PIF3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.08■□□□□ 0.49
NPIPA2E9PIF3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPIPA2E9PIF3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
NPIPA2E9PIF3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms