Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
YJEFN3A6XGL0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
YJEFN3A6XGL0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
YJEFN3A6XGL0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 AL121829.2-201ENST00000620908 328 ntBASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.79■□□□□ 0.92
YJEFN3A6XGL0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 PHGDH-210ENST00000641115 1638 ntBASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
YJEFN3A6XGL0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 AL121906.2-201ENST00000621597 723 ntBASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
YJEFN3A6XGL0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
YJEFN3A6XGL0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
YJEFN3A6XGL0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
YJEFN3A6XGL0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 AC116351.2-201ENST00000606540 1585 ntBASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 C1QBPP2-201ENST00000528754 825 ntBASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 AL023875.1-201ENST00000640777 796 ntBASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
YJEFN3A6XGL0 AC018553.1-201ENST00000616682 1458 ntBASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 GCSHP5-201ENST00000443090 522 ntBASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 RPPH1-201ENST00000516869 333 ntBASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
YJEFN3A6XGL0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms